|
|
@857
|
6 years |
Maciej Komosinski |
Initialized variables in all cases to make potential errors evident
|
|
|
@853
|
6 years |
Maciej Komosinski |
The official C++17 fallthrough? attribute instead of comments no break
|
|
|
@841
|
6 years |
Maciej Komosinski |
Updated #includes after splitting stl-util into util-stl, util-file …
|
|
|
@835
|
6 years |
Maciej Komosinski |
ISO C++17 compliance including NULL, nullptr, templates and pointer …
|
|
|
@831
|
6 years |
Maciej Komosinski |
Fixed broken neuron creation (missing argument - regression from r760, …
|
|
|
@830
|
6 years |
Maciej Komosinski |
"%ld" replaced with "%d" because it refers to int
|
|
|
@829
|
6 years |
Maciej Komosinski |
Removed unnecessary cast, "long" is equivalent to "int" in our compilations
|
|
|
@821
|
6 years |
Maciej Komosinski |
Performance and stability improvements in fB, fH, and fL; improved …
|
|
|
@809
|
6 years |
Maciej Komosinski |
Fixed a signed/unsigned warning
|
|
|
@808
|
6 years |
Maciej Komosinski |
New option for mutation in numerical encoding fn: mutate all variables …
|
|
|
@804
|
7 years |
Maciej Komosinski |
Fixed memory leak and uninitialized int
|
|
|
@803
|
7 years |
Maciej Komosinski |
Performance improvements, including avoiding unnecessary passing of …
|
|
|
@802
|
7 years |
Maciej Komosinski |
Crossing over with less bloat, but still biologically-inspired
|
|
|
@801
|
7 years |
Maciej Komosinski |
Added a helper function that counts active neuron classes
|
|
|
@797
|
7 years |
Maciej Komosinski |
A more complete implementation of fB, fH, fL
|
|
|
@788
|
7 years |
Maciej Komosinski |
Fixed #include filename for f8 converter
|
|
|
@787
|
7 years |
Maciej Komosinski |
Removed a comment; sprintf() gives more control and precision than …
|
|
|
@783
|
7 years |
Maciej Komosinski |
Removed the unused "info" field and fixed a bug with incorrect …
|
|
|
@780
|
7 years |
Maciej Komosinski |
Added sources for genetic encodings fB, fH, fL
|
|
|
@779
|
7 years |
Maciej Komosinski |
Unified file names of all files involved in genetic conversions and …
|
|
|
@777
|
7 years |
Maciej Komosinski |
Fixed a typo
|
|
|
@776
|
7 years |
Maciej Komosinski |
Removed extra checkpoint
|
|
|
@774
|
7 years |
Maciej Komosinski |
Removed unused "state" field (issue number 19), improved docs (issues …
|
|
|
@773
|
7 years |
Maciej Komosinski |
Improved styling implementation, fixes issue number 18 [refs #62]
|
|
|
@772
|
7 years |
Maciej Komosinski |
Unified #define modifiers in f1 and f4, fixes issue number 16 [refs #62]
|
|
|
@771
|
7 years |
Maciej Komosinski |
Added color and size modifiers in f4; avoided unnecessary conditions …
|
|
|
@770
|
7 years |
Maciej Komosinski |
Avoided "min" and "max" as variable names, fixes issue 22 [refs #62]
|
|
|
@768
|
7 years |
Maciej Komosinski |
Reverted to 100x repeat-until-valid-mutation, required due to how …
|
|
|
@767
|
7 years |
Maciej Komosinski |
More strict parsing of the repetition counter; bug fixes; improved …
|
|
|
@765
|
7 years |
Maciej Komosinski |
Wider ranges of allowed values for mutation when only partial …
|
|
|
@764
|
7 years |
Maciej Komosinski |
Less deterministic (less absorbing) mutation for very narrow allowed …
|
|
|
@763
|
7 years |
Maciej Komosinski |
Higher precision when storing variable values
|
|
|
@762
|
7 years |
Maciej Komosinski |
Default sample values for a 2D problem, not 1D; added documentation …
|
|
|
@761
|
7 years |
Maciej Komosinski |
Introduced a macro for the number of times GenMan? tries to repeat a …
|
|
|
@760
|
7 years |
Maciej Komosinski |
- added support for new API for neuron types and their properties
- …
|
|
|
@759
|
7 years |
Maciej Komosinski |
f1 and f4 stick properties unified and moved to a separate structure …
|
|
|
@758
|
7 years |
Maciej Komosinski |
Added a few useful functions providing lists of neurons with specific …
|
|
|
@757
|
7 years |
Maciej Komosinski |
Removed appending the original fn genotype as a comment in the …
|
|
|
@752
|
7 years |
Maciej Komosinski |
Mutation in the 'fn' encoding respects custom min,max,stddev for each …
|
|
|
@751
|
7 years |
Maciej Komosinski |
More versatile mutation function for numbers
|
|
|
@750
|
7 years |
Maciej Komosinski |
More proper definition of the crossover parameter
|
|
|
@749
|
7 years |
Maciej Komosinski |
Added a new function to linearly mix two vectors of real numbers
|
|
|
@748
|
7 years |
Maciej Komosinski |
Configured and activated the new "fn" genetic representation
|
|
|
@747
|
7 years |
Maciej Komosinski |
Added a new "fn" genetic representation (a vector of real numbers for …
|
|
|
@743
|
7 years |
Maciej Komosinski |
Introduced different function names in C++ instead of overloading …
|
|
|
@740
|
7 years |
Maciej Komosinski |
Added support for developmental phases ("checkpoints") to converters …
|
|
|
@736
|
7 years |
Maciej Komosinski |
Added the new "using_checkpoints" argument to genetic converters so …
|
|
|
@735
|
7 years |
Maciej Komosinski |
Base genotype converter is now abstract, which triggers compilation …
|
|
|
@732
|
7 years |
Maciej Komosinski |
Added support for "checkpoints" (intermediate phases of development of …
|
|
|
@726
|
7 years |
Maciej Komosinski |
- Changed Model::singleStepBuild() to Model::addFromString() to create …
|
|
|
@720
|
7 years |
Maciej Komosinski |
Param::save2() renamed to saveSingleLine(); unified Param::load() so …
|
|
|
@719
|
7 years |
Maciej Komosinski |
f1->f0 mapping maps ',' and ')' symbols to the branching Part (earlier …
|
|
|
@716
|
7 years |
Maciej Komosinski |
The f1 converter is now able to map more than one genotype character …
|
|
|
@715
|
7 years |
Maciej Komosinski |
GenMan?'s constructor now calls its setDefaults() to initialize all …
|
|
|
@714
|
7 years |
Maciej Komosinski |
- Setting default NeuroClass? active/genactive in preconfigured …
|
|
|
@676
|
7 years |
Maciej Komosinski |
Improved comments, removed unnecessary TODO regarding "Rr" modifiers
|
|
|
@675
|
7 years |
Maciej Komosinski |
Code formatting
|
|
|
@674
|
7 years |
Maciej Komosinski |
f4 modifiers implemented similarly to f1 modifiers, and a base for …
|
|
|
@673
|
7 years |
Maciej Komosinski |
Added three functions that may be useful in general
|
|
|
@672
|
7 years |
Maciej Komosinski |
More appropriate name for the "model_energy_max" variable
|
|
|
@671
|
7 years |
Maciej Komosinski |
Unified property names of f1 and f4; improved docs; 3.141 -> M_PI
|
|
|
@670
|
7 years |
Maciej Komosinski |
Improved variable names and docs
|
|
|
@669
|
7 years |
Maciej Komosinski |
As default foraminifera initial chamber radius in Framsticks units …
|
|
|
@668
|
8 years |
Maciej Komosinski |
Fixed argument type in GenMan?.getSimplest()
|
|
|
@667
|
8 years |
Maciej Komosinski |
- fF foraminifera encoding supports scaling (radius) of the initial …
|
|
|
@664
|
8 years |
Maciej Komosinski |
Mark last Part white - a visual aid for easier editing of f9 genotypes
|
|
|
@643
|
8 years |
Maciej Komosinski |
The meaning of f9 3D-direction genes made consistent with Framsticks …
|
|
|
@551
|
8 years |
Maciej Komosinski |
PreconfiguredGenetics? warns about unexpected use case and unregisters …
|
|
|
@544
|
8 years |
Maciej Komosinski |
Renamed:
Model::getShape() ==> Model::getShapeType()
Model::SHAPE_OLD …
|
|
|
@534
|
8 years |
Maciej Komosinski |
Renamed: get/setGene -> get/setGenes, setGeneOnly -> …
|
|
|
@532
|
8 years |
Maciej Komosinski |
A new set of getStyle/getFullStyle functions in GenMan? and cosmetic …
|
|
|
@530
|
8 years |
Maciej Komosinski |
Strict parsing of genotype format prefix
|
|
|
@528
|
8 years |
Maciej Komosinski |
- Part.m removed
- Part.h becomes XPROP
- validate more part and joint …
|
|
|
@522
|
8 years |
Maciej Komosinski |
Code formatting
|
|
|
@521
|
8 years |
Maciej Komosinski |
Extended error messages for invalid genotype format declaration
|
|
|
@518
|
8 years |
Maciej Komosinski |
More strict parsing of genotype format prefix
|
|
|
@516
|
8 years |
Maciej Komosinski |
Geno format as a string (no longer ascii number)
|
|
|
@514
|
9 years |
Maciej Komosinski |
More strict parsing of numbers when converting genotypes f1->f0
|
|
|
@513
|
9 years |
Maciej Komosinski |
checkValidity() and validate() are now aware of genotype name
|
|
|
@508
|
9 years |
Maciej Komosinski |
Conditional macro to identify for which genotypes the order of …
|
|
|
@500
|
9 years |
Maciej Komosinski |
Fixed uninit - previously cached f0 might have been treated as invalid
|
|
|
@494
|
9 years |
Maciej Komosinski |
Empty destructor no longer needed since it is present in the base …
|
|
|
@492
|
9 years |
Maciej Komosinski |
emscripten compatibility
|
|
|
@483
|
9 years |
Maciej Komosinski |
Unified DEBUG macro ( -> _DEBUG )
|
|
|
@467
|
9 years |
Maciej Komosinski |
GenMan? interface uses STL std::string instead of SString
|
|
|
@452
|
9 years |
Maciej Komosinski |
Validation of genotypes additionally prints genotype name when there …
|
|
|
@408
|
9 years |
Maciej Komosinski |
Typos
|
|
|
@391
|
10 years |
sz |
Moved frams/loggers to common/loggers
|
|
|
@375
|
10 years |
Maciej Komosinski |
Renamed logging functions to more intuitive and simple names
|
|
|
@372
|
10 years |
sz |
Renamed some classes and functions to make their purpose more obvious: …
|
|
|
@348
|
10 years |
Maciej Komosinski |
- explicit c_str() in SString instead of (const char*) cast
- genetic …
|
|
|
@346
|
10 years |
Maciej Komosinski |
Each thread can use its own simulator's GenMan?
|
|
|
@344
|
10 years |
Maciej Komosinski |
Non-COW string compatibility (const char* is always invalid after …
|
|
|
@319
|
10 years |
Maciej Komosinski |
Fixed compilation warnings
|
|
|
@288
|
10 years |
Maciej Komosinski |
GDK->SDK, gdk_test.cpp -> genomanipulation.cpp
|
|
|
@287
|
10 years |
Maciej Komosinski |
GDK->SDK
|
|
|
@286
|
10 years |
Maciej Komosinski |
Updated headers
|
|
|
@280
|
10 years |
Maciej Komosinski |
Version 4.0
|
|
|
@275
|
10 years |
Maciej Komosinski |
Inheritance information during crossing over properly stored as a …
|
|
|
@271
|
10 years |
Maciej Komosinski |
Refreshed header comments
|
|
|