Timeline
08/18/16:
- 22:01 Changeset [586] by
- Tiny refactoring of tree-genealogy.py
- 21:58 Changeset [585] by
- Added an option for defining colors of crossover / mutation lines from the command line
- 21:37 Changeset [584] by
- Positions of foraminifera, reticulopodia and nutrients corrected.
- 15:35 Changeset [583] by
- Chamber growth visualization moved to the separate function.
- 14:41 Changeset [582] by
- Added comments and TODOs
- 14:09 Changeset [581] by
- Brighter colors
- 12:30 Changeset [580] by
- Vertical position of enhanced visualization of nutrient lowered.
- 12:15 Changeset [579] by
- Vertical position of foraminifera lowered. Color of body and reticulopodia unified.
08/09/16:
- 21:29 Changeset [578] by
- object creation and removal is now reflected in the blender scene view (using the "hide" property keyframes)
- 19:38 Changeset [577] by
- Supporting coloring edges and nodes by type, scalable dots
- 18:30 Changeset [576] by
- Simple scale
- 01:09 Changeset [575] by
- When the last chamber is growing, make it gray and add extra information in its "i" field
- 01:08 Changeset [574] by
- More strict validation of numeric type definitions: min without max is now invalid. More code is now reused.
08/08/16:
- 22:49 Changeset [573] by
- Inherited entry for cross-over corrected.
- 20:13 Changeset [572] by
- Added crossover and support for Inheritance table (but the table itself is not used currently, we are assuming Inheritance = 1!)
- 16:10 Changeset [571] by
- Additional options in tree-genealogy.py, dots and jitter
- 01:00 Changeset [570] by
- Improved help message
- 00:49 Changeset [569] by
- Chamber growth visualization time extended. Nutrient energy corrected.
08/07/16:
- 17:02 Changeset [568] by
- Used secPerStep values added in help, setPerStep in show set to 50.
- 15:05 Changeset [567] by
- Chamber growth visualization added, [OFFSPRING] message added, refactoring.
08/06/16:
- 02:16 Changeset [566] by
- Added REAL time option for tree-genealogy.py, renamed previous REAL time to BIRTHS time
- 01:27 Changeset [565] by
- Script for plotting results of the MDS added.
08/05/16:
- 23:25 Changeset [564] by
- some changes to drawing style + non-random dissimilarity + assertion
- 23:15 Changeset [563] by
- updated to the new input format
- 20:23 Changeset [562] by
- Added a script to draw genealogical trees based on parent-child relationship information
08/04/16:
- 23:32 Changeset [561] by
- 7% chamber growth instead of 5%; tighter spiral in morphology
08/03/16:
- 00:29 Changeset [560] by
- Fixed a typo
08/02/16:
- 21:21 Changeset [559] by
- Foram genotype generator can produce genotypes with the last chamber smaller ("growing" from 0 to 1)
- 20:42 Changeset [558] by
- - Add color to Parts - Tighter spiral
- 18:52 Changeset [557] by
- - Fixed extra space after property ID - A function to generate simple planispiral forams
08/01/16:
- 15:31 Changeset [556] by
- Properties descriptions corrected.
07/31/16:
- 23:33 Changeset [555] by
- Visual style for enhanced nutrients restored.
- 23:26 Changeset [554] by
- Refactoring, change of foraminifera direction at world boundary added.
- 02:25 Changeset [553] by
- Added visual style for "enhanced nutrients"
07/30/16:
- 15:18 Changeset [552] by
- Dir_changed_sec changed from global to ExpProperty?, new divisionCost and energy_nut, direction change counter added in creature lifeparams, lifespan log added.
- 03:19 Changeset [551] by
- PreconfiguredGenetics? warns about unexpected use case and unregisters its objects on destruction
- 03:18 Changeset [550] by
- LoggerToStdout? used in geometry tests. PreconfiguredGenetics? moved to execute() (near other init things)
- 02:38 Changeset [549] by
- More correct use of PreconfiguredGenetics?: avoid static objects, create after logger is configured (so warnings can be printed)
- 02:37 Changeset [548] by
- Improved description/docs
07/29/16:
- 23:58 Ticket #53 (ModelGeometry: Uninitialized Pt3D object?) closed by
- invalid: False alarm! Uninitialized was purposeful where it was detected.
- 00:21 Changeset [547] by
- PreconfiguredGenetics? added in geometrytestutils
07/28/16:
- 23:59 Ticket #53 (ModelGeometry: Uninitialized Pt3D object?) created by
- The first point to enter EllipsoidSurface::tryGetNext(Pt3D &point) is …
- 23:58 Ticket #52 (ModelGeometry: test geometry measure using boundary test cases and valgrind) created by
- 23:57 Ticket #51 (ModelGeometry: sqrt(negative)) created by
- "sqrt: DOMAIN error" for example: […] Visual Studio output: …
- 03:39 Changeset [546] by
- Renamed: Model::buildUsingNewShapes -> Model::buildUsingSolidShapeTypes() Added class SolidsShapeTypeModel? (for making ball-and-stick Models look like solids-type Models) ModelGeometryInfo? functions: findSizesAndAxesOfModel(), volume() and area() now accept ball-and-stick Models (using SolidsShapeTypeModel? class) [refs #46] and possibly closes this issue (needs verification)
- 01:11 Changeset [545] by
- Dictionary.set() documentation updated
- 01:09 Changeset [544] by
- Renamed: Model::getShape() ==> Model::getShapeType() Model::SHAPE_OLD ==> Model::SHAPE_BALL_AND_STICK Model::SHAPE_NEW ==> Model::SHAPE_SOLIDS Part::SHAPE_DEFAULT ==> Part::SHAPE_BALL_AND_STICK Joint::SHAPE_DEFAULT ==> Joint::SHAPE_BALL_AND_STICK Joint::SHAPE_SOLID ==> Joint::SHAPE_FIXED
07/27/16:
- 20:08 Changeset [543] by
- Improved description
- 17:52 Changeset [542] by
- Explicit casting to integer ("0+x" trick no longer works)
07/26/16:
- 18:52 Changeset [541] by
- Division by 0.0 for a single ellipsoid fixed [closes #42]. Sampling the same point twice fixed.
- 18:34 Changeset [540] by
- Meshbuilder.cpp added.
- 18:20 Ticket #42 (ModelGeometry division by 0.0 for a single ellipsoid shape) closed by
- fixed: In 539: […]
- 18:20 Changeset [539] by
- Division by 0.0 for a single ellipsoid fixed [closes #42]. Sampling the same point twice fixed.
07/24/16:
- 13:50 Changeset [538] by
- Value of the assignment statement is now consistently the assigned value. Previously it was the value returned from set() (in cases where set() is used and the assigned expression is not a constant). Interestingly, Dictionary.set() returns the "before" value for the given key, and this created the delayed "assignment propagation" effect.
- 13:45 Changeset [537] by
- ExpParams? -> ExpProperties? (compatibility with v5.x)
07/20/16:
- 14:57 Changeset [536] by
- "Shaped" models use the same p.mass calculation as "old" models (influences simulation stability)
- 14:57 Changeset [535] by
- - More strict type description checking when adding a property in mutableparam - Error message when the param property could not be added for some reason
- 01:17 Changeset [534] by
- Renamed: get/setGene -> get/setGenes, setGeneOnly -> setGenesAssumingSameFormat
07/19/16:
- 18:12 Changeset [533] by
- - Improved error message on superfluous param values - Don't call flags(i) for illegal i
- 18:11 Changeset [532] by
- A new set of getStyle/getFullStyle functions in GenMan? and cosmetic rename of other functions (first letter lowercase)
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