Timeline
09/05/16:
- 03:39 Changeset [610] by
- - Introduced levels of checking the validity of a Model - If a Joint is too long, print how much it exceeds the maximum allowed length
09/02/16:
- 00:06 Changeset [609] by
- Labels can have colors dependent on label text
09/01/16:
- 17:01 Changeset [608] by
- Displays the fraction of variance preserved after MDS
- 16:39 Changeset [607] by
- Updated for new format of dissimilarity matrix (with the optional two extra columns on the left, compatible with Framsticks CLI and GUI)
08/30/16:
- 17:42 Changeset [606] by
- Code formatting
- 17:39 Changeset [605] by
- - Added 'fixedZaxis' option to paramtab (so that it is accessible from scripts) - Variable renames, improvements in comments
- 17:08 Changeset [604] by
- Made the amount of jitter a continuous, adjustable parameter
08/28/16:
- 18:34 Changeset [603] by
- Integer command line arguments converted to ints in main call.
- 17:00 Changeset [602] by
- - More flexible reading of distance matrices from files - Can also read labels for individual points and display them
- 15:19 Changeset [601] by
- Possibility of fixing z axis during the alignment added.
- 15:04 Changeset [600] by
- Number of returned dimensions set to minimum of desired number and the number returned by mds.
08/25/16:
- 17:48 Changeset [599] by
- Function for computing variances removed.
- 17:44 Changeset [598] by
- MDS algorithm changed to cmdscale. Coordinates export to file added.
08/24/16:
- 03:54 Changeset [597] by
- No longer ignores "jitter" and "outname" parameters
- 03:52 Changeset [596] by
- Uncomment to make it work with no graphical backend
08/23/16:
- 21:28 Changeset [595] by
- Rotation of creatures in z axis changed to random. LocalDrive? usage replaced by drive.
- 18:13 Changeset [594] by
- Fixed drawing the spine and the skeleton for the tree-genealogy.py
08/22/16:
- 15:07 Changeset [593] by
- Added the missing visual style declaration for foraminifera creatures
- 01:47 Changeset [592] by
- More meaningful variable names
- 01:43 Changeset [591] by
- Added a comment
- 01:26 Changeset [590] by
- Feed period changed to food flux in grams per square meter per second. Theater parameters updated.
08/20/16:
- 17:27 Ticket #54 (ModelGeometry and fF: fix conv_fF and scale<1 and find_hole==-1) created by
- - investigate and understand the find_hole() function in fF - discover …
08/19/16:
- 23:59 Changeset [589] by
- Fixed dark lines inside lines in tree-genealogy.py
- 11:35 Changeset [588] by
- Movement of forams in z axis restricted.
- 00:27 Changeset [587] by
- Enhanced nutrient visualization corrected.
08/18/16:
- 22:01 Changeset [586] by
- Tiny refactoring of tree-genealogy.py
- 21:58 Changeset [585] by
- Added an option for defining colors of crossover / mutation lines from the command line
- 21:37 Changeset [584] by
- Positions of foraminifera, reticulopodia and nutrients corrected.
- 15:35 Changeset [583] by
- Chamber growth visualization moved to the separate function.
- 14:41 Changeset [582] by
- Added comments and TODOs
- 14:09 Changeset [581] by
- Brighter colors
- 12:30 Changeset [580] by
- Vertical position of enhanced visualization of nutrient lowered.
- 12:15 Changeset [579] by
- Vertical position of foraminifera lowered. Color of body and reticulopodia unified.
08/09/16:
- 21:29 Changeset [578] by
- object creation and removal is now reflected in the blender scene view (using the "hide" property keyframes)
- 19:38 Changeset [577] by
- Supporting coloring edges and nodes by type, scalable dots
- 18:30 Changeset [576] by
- Simple scale
- 01:09 Changeset [575] by
- When the last chamber is growing, make it gray and add extra information in its "i" field
- 01:08 Changeset [574] by
- More strict validation of numeric type definitions: min without max is now invalid. More code is now reused.
08/08/16:
- 22:49 Changeset [573] by
- Inherited entry for cross-over corrected.
- 20:13 Changeset [572] by
- Added crossover and support for Inheritance table (but the table itself is not used currently, we are assuming Inheritance = 1!)
- 16:10 Changeset [571] by
- Additional options in tree-genealogy.py, dots and jitter
- 01:00 Changeset [570] by
- Improved help message
- 00:49 Changeset [569] by
- Chamber growth visualization time extended. Nutrient energy corrected.
08/07/16:
- 17:02 Changeset [568] by
- Used secPerStep values added in help, setPerStep in show set to 50.
- 15:05 Changeset [567] by
- Chamber growth visualization added, [OFFSPRING] message added, refactoring.
08/06/16:
- 02:16 Changeset [566] by
- Added REAL time option for tree-genealogy.py, renamed previous REAL time to BIRTHS time
- 01:27 Changeset [565] by
- Script for plotting results of the MDS added.
Note: See TracTimeline
for information about the timeline view.
