Changeset 418 for experiments/frams/foraminifera/data/scripts/foraminifera.expdef

Timestamp:

08/01/15 16:32:10 (9 years ago)

Author:

oriona

Message:

invalid index error fixed

File:

• experiments/frams/foraminifera/data/scripts/foraminifera.expdef (modified) (7 diffs)

experiments/frams/foraminifera/data/scripts/foraminifera.expdef

@@ -24 +24 @@
 - added "S" receptor to visualize the difference between diplo and haplo generations
 - signal.value is a MechPart (a reference) so it does not have to be updated after changing the object location
-*/
-
-/* TODO fix
-[ERROR] Population.kill: Invalid index 35 (allowed range is 0..34)
-[ERROR] Population.kill: ... called from reproduce_haploid()  <foraminifera.inc:54>
-[ERROR] Population.kill: ... called from onStep()  <foraminifera.inc:228>
 */
 
@@ -69 +63 @@
         pop.othermask = 0x10000;
 
+        //TODO remove unused params
+
         //radius of the chamber
         ExpParams.rads = [1.2, 0.6];
+        //ExpParams.rads = [2, 2];
         //inital genotypes
         ExpParams.genh = "//0\np:sh=1,sx=" + ExpParams.rads[0] + ",sy=" + ExpParams.rads[0] + ",sz=" + ExpParams.rads[0] + ", rz=3.14159265358979";
@@ -80 +77 @@
         ExpParams.feedtrans = 3;
         ExpParams.creath = -0.99; //just above the bottom
-        ExpParams.foodgen = "//0\np:sh=2,sx=0.1,sy=0.1,sz=0.1\nn:d=T,p=0";
+        ExpParams.foodgen = "//0\np:sh=2,sx=0.1,sy=0.1,sz=0.1\nn:d=T,p=0"; //TODO food size as param
         ExpParams.autorestart = 0;
         ExpParams.psize = 10;
@@ -102 +99 @@
 
         //grwoth speed in time steps
-        ExpParams.growth_step = 50;
+        ExpParams.growth_step = 50; //50
 
         ExpState.totaltestedcr = 0;
@@ -308 +305 @@
                 else
                 {
-                        properSize = cr.user2["Va"] >= cr.user1[0]["vamin"];
+                        properSize = cr.user2["Va"] >= cr.user1[0]["vamin"]; //TODO gene selection
                 }
 
@@ -333 +330 @@
         geno.user1 = cr.user1;
         geno.user2 = cr.user2;
-        Simulator.print("\"" + cr.name + "\" died...");
+        if (ExpParams.logging == 1) Simulator.print("\"" + cr.name + "\" died...");
         ExpState.totaltestedcr++;
 }
@@ -422 +419 @@
 id:growth_step
 name:Growth step
-type:d 10 10000 1000
+type:d -1 10000 1000
 
 prop: