source: java/main/src/main/java/com/framsticks/parsers/GenotypeLoader.java @ 85

package com.framsticks.parsers;

import com.framsticks.model.Genotype;
import com.framsticks.params.*;
import com.framsticks.params.types.*;

import org.apache.log4j.Logger;

public class GenotypeLoader extends MultiParamLoader {
        private Genotype genotypeReturnObject = new Genotype();
        private static Logger logger = Logger.getLogger(GenotypeLoader.class);

        public GenotypeLoader() throws Exception {

                FramsClass entries = new FramsClass("Genotype", "org", "A Genotype with the associated performance information. All but one Genotype objects are placed in Genotype Groups. There is also a single static Genotype object not associated with a group, which is used as a temporary storage by genetic operators and some functions from GenePools.");
                entries
                        .appendGroup(new Group("Body"))
                        .appendGroup(new Group("Performance"))
                        .appendGroup(new Group("Fitness"))
                        .appendGroup(new Group("Conversions"));

                //getId, group-number, getFlags, getName, getType(getType min max), getHelp
                entries
                        .append(Param.build().id("name").group(0).name("Name").type(StringParam.class).min(0).max(40))
                        .append(Param.build().id("genotype").group(0).name("Genotype").type(StringParam.class).min(1))
                        .append(Param.build().id("info").group(0).name("Info").type(StringParam.class).min(1).help("Additional information or comments"))
                        .append(Param.build().id("simi").group(1).flags(Flags.READONLY | Flags.DONTSAVE).name("Similarity").type(FloatParam.class))
                        .append(Param.build().id("energ0").group(1).flags(Flags.READONLY | Flags.DONTSAVE).name("Starting energy").type(FloatParam.class))
                        .append(Param.build().id("strsiz").group(1).flags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).name("Body parts (deprecated; use numparts)").type(FloatParam.class))
                        .append(Param.build().id("strjoints").group(1).flags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).name("Body joints (deprecated; use numjoints)").type(FloatParam.class))
                        .append(Param.build().id("nnsiz").group(1).flags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).name("Brain size (deprecated; use numneurons)").type(FloatParam.class))
                        .append(Param.build().id("nncon").group(1).flags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).name("Brain connections (deprecated; use numconnections)").type(FloatParam.class))
                        .append(Param.build().id("numparts").group(1).flags(Flags.READONLY | Flags.DONTSAVE).name("Body parts").type(FloatParam.class))
                        .append(Param.build().id("numjoints").group(1).flags(Flags.READONLY | Flags.DONTSAVE).name("Body joints").type(FloatParam.class))
                        .append(Param.build().id("numneurons").group(1).flags(Flags.READONLY | Flags.DONTSAVE).name("Brain size").type(FloatParam.class))
                        .append(Param.build().id("numconnections").group(1).flags(Flags.READONLY | Flags.DONTSAVE).name("Brain connections").type(FloatParam.class))
                        .append(Param.build().id("num").group(2).name("Ordinal number").type(DecimalParam.class))
                        .append(Param.build().id("gnum").group(2).name("Generation").type(DecimalParam.class))
                        .append(Param.build().id("popsiz").group(2).flags(Flags.USERHIDDEN).name("Deprecated; use entities").type(DecimalParam.class))
                        .append(Param.build().id("entities").group(2).flags(Flags.DONTSAVE).name("Instances").type(DecimalParam.class).help("Copies of this genotype"))
                        .append(Param.build().id("lifespan").group(2).name("Life span").type(FloatParam.class).help("Average life span"))
                        .append(Param.build().id("velocity").group(2).name("Velocity").type(FloatParam.class).help("Average velocity"))
                        .append(Param.build().id("distance").group(2).name("Distance").type(FloatParam.class))
                        .append(Param.build().id("vertvel").group(2).name("Vertical velocity").type(FloatParam.class))
                        .append(Param.build().id("vertpos").group(2).name("Vertical position").type(FloatParam.class))
                        .append(Param.build().id("fit").group(3).flags(Flags.READONLY | Flags.DONTSAVE).name("Fitness").type(FloatParam.class))
                        .append(Param.build().id("fit2").group(3).flags(Flags.READONLY | Flags.DONTSAVE).name("Final fitness").type(FloatParam.class).help("Fitness shifted by (avg-n*stddev)"))
                        .append(Param.build().id("f0genotype").group(4).flags(Flags.READONLY | Flags.DONTSAVE).name("f0 genotype").type(StringParam.class).min(1).help("converted to f0 genotype"))
                        .append(Param.build().id("user1").group(2).name("User field 1").type(UniversalParam.class))
                        .append(Param.build().id("user2").group(2).name("User field 2").type(UniversalParam.class))
                        .append(Param.build().id("user3").group(2).name("User field 3").type(UniversalParam.class))
                        .append(Param.build().id("isValid").group(0).flags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).name("Valid").type(DecimalParam.class).min(0).max(1))
                        .append(Param.build().id("uid").group(0).flags(Flags.READONLY | Flags.USERHIDDEN).name("#").type("s").help("Unique identifier"));

                ReflectionAccess reflectionParam = new ReflectionAccess(Genotype.class, entries);
                addAccessInterface(reflectionParam);
                addBreakCondition(Status.AfterObject);
        }

        public Genotype loadNextGenotype() throws Exception {
                logger.info("Loading next genotype");
                Status result = go();

                if (result == Status.AfterObject) {
                        return genotypeReturnObject;
                }

                return null;
        }
}