source: java/main/src/main/java/com/framsticks/parsers/GenotypeLoader.java @ 77

package com.framsticks.parsers;

import com.framsticks.model.Genotype;
import com.framsticks.params.*;
import com.framsticks.params.types.*;

import org.apache.log4j.Logger;

public class GenotypeLoader extends MultiParamLoader {
        private Genotype genotypeReturnObject = new Genotype();
        private static Logger logger = Logger.getLogger(GenotypeLoader.class);

        public GenotypeLoader() throws Exception {

                FramsClass entries = new FramsClass("Genotype", "org", "A Genotype with the associated performance information. All but one Genotype objects are placed in Genotype Groups. There is also a single static Genotype object not associated with a group, which is used as a temporary storage by genetic operators and some functions from GenePools.");
                entries
                        .appendGroup(new Group("Body"))
                        .appendGroup(new Group("Performance"))
                        .appendGroup(new Group("Fitness"))
                        .appendGroup(new Group("Conversions"));

                //getId, group-number, getFlags, getName, getType(getType min max), getHelp
                entries
                        .append(new ParamBuilder().setId("name").setGroup(0).setName("Name").setType(new StringParam()).setMin(0).setMax(40).build())
                        .append(new ParamBuilder().setId("genotype").setGroup(0).setName("Genotype").setType(new StringParam()).setMin(1).build())
                        .append(new ParamBuilder().setId("info").setGroup(0).setName("Info").setType(new StringParam()).setMin(1).setHelp("Additional information or comments").build())
                        .append(new ParamBuilder().setId("simi").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Similarity").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("energ0").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Starting energy").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("strsiz").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).setName("Body parts (deprecated; use numparts)").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("strjoints").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).setName("Body joints (deprecated; use numjoints)").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("nnsiz").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).setName("Brain size (deprecated; use numneurons)").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("nncon").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).setName("Brain connections (deprecated; use numconnections)").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("numparts").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Body parts").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("numjoints").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Body joints").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("numneurons").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Brain size").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("numconnections").setGroup(1).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Brain connections").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("num").setGroup(2).setName("Ordinal number").setType(new DecimalParam()).build())
                        .append(new ParamBuilder().setId("gnum").setGroup(2).setName("Generation").setType(new DecimalParam()).build())
                        .append(new ParamBuilder().setId("popsiz").setGroup(2).setFlags(Flags.USERHIDDEN).setName("Deprecated; use entities").setType(new DecimalParam()).build())
                        .append(new ParamBuilder().setId("entities").setGroup(2).setFlags(Flags.DONTSAVE).setName("Instances").setType(new DecimalParam()).setHelp("Copies of this genotype").build())
                        .append(new ParamBuilder().setId("lifespan").setGroup(2).setName("Life span").setType(new FloatParam()).setHelp("Average life span").build())
                        .append(new ParamBuilder().setId("velocity").setGroup(2).setName("Velocity").setType(new FloatParam()).setHelp("Average velocity").build())
                        .append(new ParamBuilder().setId("distance").setGroup(2).setName("Distance").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("vertvel").setGroup(2).setName("Vertical velocity").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("vertpos").setGroup(2).setName("Vertical position").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("fit").setGroup(3).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Fitness").setType(new FloatParam()).build())
                        .append(new ParamBuilder().setId("fit2").setGroup(3).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("Final fitness").setType(new FloatParam()).setHelp("Fitness shifted by (avg-n*stddev)").build())
                        .append(new ParamBuilder().setId("f0genotype").setGroup(4).setFlags(Flags.READONLY | Flags.DONTSAVE).setName("f0 genotype").setType(new StringParam()).setMin(1).setHelp("converted to f0 genotype").build())
                        .append(new ParamBuilder().setId("user1").setGroup(2).setName("User field 1").setType(new UniversalParam()).build())
                        .append(new ParamBuilder().setId("user2").setGroup(2).setName("User field 2").setType(new UniversalParam()).build())
                        .append(new ParamBuilder().setId("user3").setGroup(2).setName("User field 3").setType(new UniversalParam()).build())
                        .append(new ParamBuilder().setId("isValid").setGroup(0).setFlags(Flags.READONLY | Flags.DONTSAVE | Flags.USERHIDDEN).setName("Valid").setType(new DecimalParam()).setMin(0).setMax(1).build())
                        .append(new ParamBuilder().setId("uid").setGroup(0).setFlags(Flags.READONLY | Flags.USERHIDDEN).setName("#").setType("s").setHelp("Unique identifier").build());

                ReflectionAccess reflectionParam = new ReflectionAccess(Genotype.class, entries);
                addAccessInterface(reflectionParam);
                addBreakCondition(Status.AfterObject);
        }

        public Genotype loadNextGenotype() throws Exception {
                logger.info("Loading next genotype");
                Status result = go();

                if (result == Status.AfterObject) {
                        return genotypeReturnObject;
                }

                return null;
        }
}