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Diff Rev Age Author Log Message
(edit) @1123   4 years Maciej Komosinski Added a header file for interfacing the frams-objects library (.dll …
(edit) @1122   4 years Maciej Komosinski Stick thickness when converting "ball-and-stick" models to …
(edit) @1121   4 years Maciej Komosinski Added comments, removed unused variables
(edit) @1120   4 years Maciej Komosinski Used a local random number generator for full determinism. Introduced …
(edit) @1119   4 years Maciej Komosinski Cache a function reference for better performance
(edit) @1118   4 years Maciej Komosinski Introduced a common constant for default stick thickness when …
(edit) @1117   4 years Maciej Komosinski Cosmetic
(edit) @1116   4 years Maciej Komosinski Improved performance significantly by moving the step-by-step …
(edit) @1115   4 years Maciej Komosinski Use default stick thickness when converting "ball-and-stick" models to …
(edit) @1114   4 years Maciej Komosinski Cosmetic
(edit) @1113   4 years Maciej Komosinski Added a framework for evolutionary algorithms cooperating with …
(edit) @1112   4 years Maciej Komosinski Added an example of sampling a 3D Model using the ModelGeometry? class
(edit) @1111   4 years Maciej Komosinski Added a function to get voxels of sampled Model geometry from script
(edit) @1110   4 years sz updated for Framsticks v5.0rc19: - SimilMeasure?.simil_type - min …
(edit) @1109   4 years Maciej Komosinski Follow-up to r1107
(edit) @1108   4 years Maciej Komosinski Avoided potentially dangerous subtraction from unsigned int
(edit) @1107   4 years Maciej Komosinski Unified names of neurons and neuron flags; muscle power range now …
(edit) @1106   4 years Maciej Komosinski Since 5.0rc19 there is no need to restore the current working …
(edit) @1105   4 years Maciej Komosinski Using the "framsfiles" module to write genotypes to a file instead of …
(edit) @1104   4 years Maciej Komosinski Added the "framsfiles" module for reading and writing …
(edit) @1103   4 years Maciej Komosinski Added an example of setting a different expdef (experiment definition)
(edit) @1102   4 years Maciej Komosinski Do not fail when the dissimilarity matrix is not symmetric, print a …
(edit) @1101   4 years Maciej Komosinski Import simulation settings only once in the beginning, not on every …
(edit) @1100   4 years Maciej Komosinski Cosmetic / minor fixes
(edit) @1099   4 years oriona Minor fix.
(edit) @1098   4 years oriona Paramter controlling output printing added.
(edit) @1097   4 years oriona Calls to deprecated parameters changed.
(edit) @1096   4 years sz restore the original working directory after frams.init()
(edit) @1095   4 years Maciej Komosinski Cosmetic
(edit) @1094   4 years Maciej Komosinski Same as r1091 but for evolution: allowed to override settings of the …
(edit) @1093   4 years Maciej Komosinski Updated settings for version 5.0rc18: added new fields and removed old …
(edit) @1092   4 years Maciej Komosinski Cosmetic
(edit) @1091   4 years Maciej Komosinski Allowed to override settings of the simulation using a file with the …
(edit) @1090   4 years Maciej Komosinski Cosmetic
(edit) @1089   4 years Maciej Komosinski Added more examples of using Framsticks in python - building …
(edit) @1088   4 years Maciej Komosinski More friendly message when the dll/so cannot be found
(edit) @1087   4 years Maciej Komosinski Cosmetic
(edit) @1086   4 years sz updated for Framsticks version 5.0rc18 - added MessageCatcher? object - …
(edit) @1085   4 years sz - more sophisticated frams.py init() so frams-test.py (and other …
(edit) @1084   4 years Maciej Komosinski Introduced bool PRINT_FRAMSTICKS_OUTPUT to mute messages while …
(edit) @1083   4 years Maciej Komosinski Allowed to override the default name of frams-objects.dll/so
(edit) @1082   4 years Maciej Komosinski Added helper functions for script access
(edit) @1081   4 years Maciej Komosinski Cosmetic
(edit) @1080   4 years Maciej Komosinski Use direct connection to Framsticks .so/.dll in evolution
(edit) @1079   4 years Maciej Komosinski Cosmetic
(edit) @1078   4 years Maciej Komosinski Direct connection from python to Framsticks .so/.dll
(edit) @1077   4 years Maciej Komosinski Fixed limited scope of for(var somevariable) …
(edit) @1076   4 years Maciej Komosinski Cosmetic
(edit) @1075   4 years Maciej Komosinski Fixed dangerous size_t-1
(edit) @1074   4 years oriona Proper genetic format set.
(edit) @1073   4 years oriona Comments added.
(edit) @1072   4 years oriona Switching off the alignment moved.
(edit) @1071   4 years oriona Weighted MDS and switching off the alignment fixed.
(edit) @1070   4 years oriona MDS for one-part creatures fixed.
(edit) @1069   4 years sz sdk tests updated (similarity)
(edit) @1068   4 years sz sdk tests updated (resize)
(edit) @1067   4 years sz sdk tests updated (remove Part.vs)
(edit) @1066   4 years Maciej Komosinski Make names of fields in SimilMeasureGreedy? unique because object …
(edit) @1065   4 years Maciej Komosinski More specific error messages
(edit) @1064   4 years Maciej Komosinski Properly allocated and de-allocated dynamic arrays of size calculated …
(edit) @1063   4 years Maciej Komosinski Updated URL for Yossi Rubner's implementation of EMD
(edit) @1062   4 years oriona Global arrays moved to emd function.
(edit) @1061   4 years oriona Static array removed.
(edit) @1060   4 years Maciej Komosinski "Vectorized" mutation for better performance due to decreased time of …
(edit) @1059   4 years Maciej Komosinski Warn when the number of performance evaluations is different from the …
(edit) @1058   4 years sz updated for Framsticks50rc16 (ModelSimilarity? replaced by SimilMeasure? …
(edit) @1057   4 years Maciej Komosinski Updated to match changes from r1024
(edit) @1056   4 years Maciej Komosinski Cosmetic
(edit) @1055   4 years Maciej Komosinski Added a workaround (potentially incorrect) for numerical instability …
(edit) @1054   4 years Maciej Komosinski Proper paramtab group names for similarity measures
(edit) @1053   4 years Maciej Komosinski Implemented missing ffs(int) for Windows compilers
(edit) @1052   4 years Maciej Komosinski Added a helper function; cosmetic changes in names and descriptions
(edit) @1051   4 years Maciej Komosinski Fixed a bug in ParamObject?: not initializing a field in paramtab, …
(edit) @1050   4 years Maciej Komosinski Renamed variables that caused problems with g++ 7.3.0 - C99, 7.1.3 …
(edit) @1049   4 years Maciej Komosinski Updates for compilation+linking of new similarity measures
(edit) @1048   4 years Maciej Komosinski SimilMeasure? -> SimilMeasureBase?; introduced a new class …
(edit) @1047   4 years Maciej Komosinski Removed no longer used sources
(edit) @1046   4 years Maciej Komosinski Fixed a declaration of a static array with a non-constant size in C++
(edit) @1045   4 years oriona Part of GeometryTestUtils? functions moved to GeometryUtils?.
(edit) @1044   4 years oriona Similarity measures code refactored. Distribution-based similarity …
(edit) @1043   4 years Maciej Komosinski Fixed the quotation character
(edit) @1042   4 years sz updated for Framsticks version 5.0rc15 most important changes: - added …
(edit) @1041   4 years Maciej Komosinski Use qsort_r() substitute when not available (Android)
(edit) @1040   4 years Maciej Komosinski Follow-up to r897: A workaround for Android bug in vsnprintf() and …
(edit) @1039   4 years Maciej Komosinski Removed Part's "visual thickness" property
(edit) @1038   4 years Maciej Komosinski Ensure that when stdin/stdout/stderr are not supported (e.g., Android …
(edit) @1037   4 years Maciej Komosinski One less compiler warning about assignment/comparison
(edit) @1036   4 years Maciej Komosinski Fixed comparison for compilers with default char = signed
(edit) @1035   4 years Maciej Komosinski Added a demo program to scale a Model and a simple test
(edit) @1034   4 years sz test results updated
(edit) @1033   4 years Maciej Komosinski Updated test results after changes to evol_test and fS
(edit) @1032   4 years Maciej Komosinski - fS: comma as an intuitive separator in genotype instead of weird …
(edit) @1031   4 years Maciej Komosinski Added a number of model geometry criteria to evolution
(edit) @1030   4 years Maciej Komosinski fS: refactoring
(edit) @1029   4 years Maciej Komosinski fL: more legal characters allowed in syntax coloring
(edit) @1028   4 years Maciej Komosinski Separated Pt2D
(edit) @1027   4 years Maciej Komosinski #defined ARRAY_LENGTH(x) replaced by std::size(x) since C++17
(edit) @1026   4 years Maciej Komosinski Workarounds for Embarcadero 10.3u3 compiler bug and incompatibility
(edit) @1025   4 years Maciej Komosinski Added a repr() function that converts a string using only printable …
(edit) @1024   4 years Maciej Komosinski evaluate() now handles a list of genotypes, not just a single genotype
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