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Diff Rev Age Author Log Message
(edit) @785   7 years Maciej Komosinski Very long string values are not printed shortened
(edit) @784   7 years Maciej Komosinski Separate messages for "string too long" and "value too big"
(edit) @783   7 years Maciej Komosinski Removed the unused "info" field and fixed a bug with incorrect …
(edit) @782   7 years oriona Typos fixed.
(edit) @781   7 years Maciej Komosinski Fixed indentation
(edit) @780   7 years Maciej Komosinski Added sources for genetic encodings fB, fH, fL
(edit) @779   7 years Maciej Komosinski Unified file names of all files involved in genetic conversions and …
(edit) @778   7 years Maciej Komosinski A few useful functions added for 2D operations
(edit) @777   7 years Maciej Komosinski Fixed a typo
(edit) @776   7 years Maciej Komosinski Removed extra checkpoint
(edit) @775   7 years Maciej Komosinski Added a note on "fn" encoding to README.txt
(edit) @774   7 years Maciej Komosinski Removed unused "state" field (issue number 19), improved docs (issues …
(edit) @773   7 years Maciej Komosinski Improved styling implementation, fixes issue number 18 [refs #62]
(edit) @772   7 years Maciej Komosinski Unified #define modifiers in f1 and f4, fixes issue number 16 [refs #62]
(edit) @771   7 years Maciej Komosinski Added color and size modifiers in f4; avoided unnecessary conditions …
(edit) @770   7 years Maciej Komosinski Avoided "min" and "max" as variable names, fixes issue 22 [refs #62]
(edit) @769   7 years sz updated for Framsticks version 5.0rc13 (Model checkpoints, f4 …
(edit) @768   7 years Maciej Komosinski Reverted to 100x repeat-until-valid-mutation, required due to how …
(edit) @767   7 years Maciej Komosinski More strict parsing of the repetition counter; bug fixes; improved …
(edit) @766   7 years Maciej Komosinski Added a number of useful methods in 2D
(edit) @765   7 years Maciej Komosinski Wider ranges of allowed values for mutation when only partial …
(edit) @764   7 years Maciej Komosinski Less deterministic (less absorbing) mutation for very narrow allowed …
(edit) @763   7 years Maciej Komosinski Higher precision when storing variable values
(edit) @762   7 years Maciej Komosinski Default sample values for a 2D problem, not 1D; added documentation …
(edit) @761   7 years Maciej Komosinski Introduced a macro for the number of times GenMan? tries to repeat a …
(edit) @760   7 years Maciej Komosinski - added support for new API for neuron types and their properties - …
(edit) @759   7 years Maciej Komosinski f1 and f4 stick properties unified and moved to a separate structure …
(edit) @758   7 years Maciej Komosinski Added a few useful functions providing lists of neurons with specific …
(edit) @757   7 years Maciej Komosinski Removed appending the original fn genotype as a comment in the …
(edit) @756   7 years Maciej Komosinski Added frams/genetics/fn to ALL_DIRS so make clean cleans all dirs
(edit) @755   7 years Maciej Komosinski Renamed ParamTree::Node -> ParamTree::ParamTreeNode? to avoid name …
(edit) @754   7 years Maciej Komosinski More strict rules for Param type descriptions and "unlimited range …
(edit) @753   7 years Maciej Komosinski Improved Vector and Dictionary deserialization: any number of spaces …
(edit) @752   7 years Maciej Komosinski Mutation in the 'fn' encoding respects custom min,max,stddev for each …
(edit) @751   7 years Maciej Komosinski More versatile mutation function for numbers
(edit) @750   7 years Maciej Komosinski More proper definition of the crossover parameter
(edit) @749   7 years Maciej Komosinski Added a new function to linearly mix two vectors of real numbers
(edit) @748   7 years Maciej Komosinski Configured and activated the new "fn" genetic representation
(edit) @747   7 years Maciej Komosinski Added a new "fn" genetic representation (a vector of real numbers for …
(edit) @746   7 years Maciej Komosinski Code formatting
(edit) @745   7 years Maciej Komosinski Renamed ParamInterface::save() -> saveMultiLine()
(edit) @744   7 years Maciej Komosinski ParamTree? constructor changed (to make it easier for javascript) to …
(edit) @743   7 years Maciej Komosinski Introduced different function names in C++ instead of overloading …
(edit) @742   7 years Maciej Komosinski Code formatting
(edit) @741   7 years Maciej Komosinski Added just for inspiration/as an example of implementation; now these …
(edit) @740   7 years Maciej Komosinski Added support for developmental phases ("checkpoints") to converters …
(edit) @739   7 years Maciej Komosinski Unlimited number of model Parts/Joints/Neurons? when displaying the …
(edit) @738   7 years Maciej Komosinski Fixed comment location in source
(edit) @737   7 years Maciej Komosinski Made destructors virtual to avoid compiler warnings
(edit) @736   7 years Maciej Komosinski Added the new "using_checkpoints" argument to genetic converters so …
(edit) @735   7 years Maciej Komosinski Base genotype converter is now abstract, which triggers compilation …
(edit) @734   7 years Maciej Komosinski SString -> std::string
(edit) @733   7 years Maciej Komosinski Code formatting
(edit) @732   7 years Maciej Komosinski Added support for "checkpoints" (intermediate phases of development of …
(edit) @731   7 years Maciej Komosinski Code formatting
(edit) @730   7 years Maciej Komosinski Added/updated comments
(edit) @729   7 years Maciej Komosinski mutableparam_test added: demonstrates usage of ParamTransaction? and …
(edit) @728   7 years Maciej Komosinski Cosmetic
(edit) @727   7 years Maciej Komosinski The sample 'y' format converter returns f0 genotype now instead of …
(edit) @726   7 years Maciej Komosinski - Changed Model::singleStepBuild() to Model::addFromString() to create …
(edit) @725   7 years Maciej Komosinski Fix crash when no data provided
(edit) @724   7 years Maciej Komosinski Two sample programs demonstrating usage of param tree
(edit) @723   7 years Maciej Komosinski Building parameter tree based on names of parameter groups defined in …
(edit) @722   7 years Maciej Komosinski Added source for Model VM object
(edit) @721   7 years Maciej Komosinski Code formatting
(edit) @720   7 years Maciej Komosinski Param::save2() renamed to saveSingleLine(); unified Param::load() so …
(edit) @719   7 years Maciej Komosinski f1->f0 mapping maps ',' and ')' symbols to the branching Part (earlier …
(edit) @718   7 years Maciej Komosinski Fixed order of constructor calls
(edit) @717   7 years sz Framsticks 5.0rc12 update
(edit) @716   7 years Maciej Komosinski The f1 converter is now able to map more than one genotype character …
(edit) @715   7 years Maciej Komosinski GenMan?'s constructor now calls its setDefaults() to initialize all …
(edit) @714   7 years Maciej Komosinski - Setting default NeuroClass? active/genactive in preconfigured …
(edit) @713   7 years Maciej Komosinski Made error message more specific
(edit) @712   7 years Maciej Komosinski Improved status and error messages
(edit) @711   7 years konrad Logs without [BORN] entries (only [OFFSPRING]) should load properly now
(edit) @710   7 years konrad Added multi-input-file support (eg. ./tree-genealogy.py -i file1.out …
(edit) @709   7 years konrad tree-genealogy.py should now work correctly with the order of events …
(edit) @708   7 years Maciej Komosinski Improved diagnostic message
(edit) @707   7 years konrad Added a warning message about merging nodes with a virtual parent node.
(edit) @706   7 years konrad No more svn ignore on mds-and-trees
(edit) @705   7 years konrad Added an example of configuration file with colormaps
(edit) @704   7 years Maciej Komosinski ParamInterface::getText() improved: removed pointless iteration when …
(edit) @703   7 years Maciej Komosinski The "ex" macro renamed to "expdef" since 5.0rc12
(edit) @702   7 years konrad Non-normalized step values for cmap can now extend outside the range …
(edit) @701   7 years konrad Fixed a bug that could occur for trees with a lot of crossover …
(edit) @700   7 years konrad Colors support matplotlib cmaps now. 'color' property in config file …
(edit) @699   7 years sz updated for the Framsticks release v5.0rc11 (mostly documentation …
(edit) @698   7 years Maciej Komosinski Explicit cast to signed integer before applying negation, this is a …
(edit) @697   7 years Maciej Komosinski More legible and consistent notation of ranges
(edit) @696   7 years konrad Changes to formating of min/max values of properties
(edit) @695   7 years konrad Using matplotlib's color package to interpret colors. Color can be now …
(edit) @694   7 years konrad Some improvements in behavior for big trees
(edit) @693   7 years sz Updated for the most recent Framsticks release v5.0rc10
(edit) @692   7 years Maciej Komosinski Updated version IDs
(edit) @691   7 years Maciej Komosinski Support for reading/parsing and writing 64-bit integer values
(edit) @690   7 years konrad Better (but not ideal) behavior for very big trees
(edit) @689   7 years Maciej Komosinski More informative message
(edit) @688   7 years Maciej Komosinski More informative message
(edit) @687   7 years konrad Using "inherited' to decide horizontal distance from the parent
(edit) @686   7 years Maciej Komosinski Made loop iteration variable implicit ("enumerate")
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