Changeset 955 for cpp/frams/genetics/genoconv.cpp

Timestamp:

06/25/20 00:34:29 (4 years ago)

Author:

Maciej Komosinski

Message:

Genetic format ID becomes a string (no longer limited to a single character)

File:

• cpp/frams/genetics/genoconv.cpp (modified) (9 diffs)

cpp/frams/genetics/genoconv.cpp

@@ -1 +1 @@
 // This file is a part of Framsticks SDK.  http://www.framsticks.com/
-// Copyright (C) 1999-2018  Maciej Komosinski and Szymon Ulatowski.
+// Copyright (C) 1999-2020  Maciej Komosinski and Szymon Ulatowski.
 // See LICENSE.txt for details.
 
@@ -57 +57 @@
                 pe->flags = 0;
                 std::string descr = "f";
-                descr += gk->in_format;
+                descr += gk->in_format.c_str();
                 descr += " --> f";
-                descr += gk->out_format;
+                descr += gk->out_format.c_str();
                 descr += "  :  ";
                 descr += gk->name;
@@ -101 +101 @@
 }
 
-GenoConverter *GenoConvManager::findConverters(SListTempl<GenoConverter*>* result, char in, char out, int enabled, char* name)
+GenoConverter *GenoConvManager::findConverters(SListTempl<GenoConverter*>* result, const SString& in, const SString& out, int enabled, char* name)
 {
         GenoConverter *gk, *retval = 0;
@@ -107 +107 @@
         for (; gk = (GenoConverter*)converters(i); i++)
         {
-                if ((in != -1) && (in != gk->in_format)) continue;
-                if ((out != -1) && (out != gk->out_format)) continue;
+                if ((in != Geno::UNKNOWN_FORMAT) && (in != gk->in_format)) continue;
+                if ((out != Geno::UNKNOWN_FORMAT) && (out != gk->out_format)) continue;
                 if ((enabled != -1) && (enabled != gk->enabled)) continue;
                 if ((name) && (strcmp(name, gk->name))) continue;
@@ -123 +123 @@
 /// (can be NULL if you don't need this information)
 
-char *GenoConvManager::getPath(char in, char out, char *path, int maxlen, int *mapavailable)
+GenoConverter **GenoConvManager::getPath(const SString& in, const SString& out, GenoConverter **path, int maxlen, int *mapavailable)
 {
         if (!maxlen) return 0;
@@ -132 +132 @@
                 if ((gk->enabled) && (gk->in_format == in))
                 {
-                        *path = (char)i;
+                        *path = gk;
                         if (gk->out_format == out)
                         {
@@ -142 +142 @@
                         {
                                 int mapavail;
-                                char *ret = getPath(gk->out_format, out, path + 1, maxlen - 1, &mapavail);
+                                GenoConverter **ret = getPath(gk->out_format, out, path + 1, maxlen - 1, &mapavail);
                                 if (ret)
                                 {
@@ -155 +155 @@
 }
 
-char *GenoConvManager::getFormatPath(char in, char out, char *path, int maxlen, int *mapavailable)
-{
-        char *ret = getPath(in, out, path, maxlen, mapavailable);
-        if (ret)
-        {
-                for (char*t = path; t <= ret; t++)
-                        *t = ((GenoConverter*)converters(*t))->out_format;
-        }
-        return ret;
-}
-
-Geno GenoConvManager::convert(Geno &in, char format, MultiMap *map, bool using_checkpoints, bool *converter_missing)
+Geno GenoConvManager::convert(Geno &in, SString format, MultiMap *map, bool using_checkpoints, bool *converter_missing)
 {
         if (in.getFormat() == format) { if (converter_missing) *converter_missing = false; return in; }
-        char path[10];
+        GenoConverter *path[10];
         int dep;
-        char *ret;
-        if (in.isInvalid()) { if (converter_missing) *converter_missing = false; return Geno("", 0, "", "invalid genotype cannot be converted"); }
+        GenoConverter **ret;
+        if (in.isInvalid()) { if (converter_missing) *converter_missing = false; return Geno("", Geno::INVALID_FORMAT, "", "invalid genotype cannot be converted"); }
         int mapavail;
         for (dep = 1; dep < (int)sizeof(path); dep++) //iterative deepening
                 if (ret = getPath(in.getFormat(), format, path, dep, &mapavail)) break;
-        if (!ret) { if (converter_missing) *converter_missing = true; return Geno("", 0, "", "converter not found"); }
+        if (!ret) { if (converter_missing) *converter_missing = true; return Geno("", Geno::INVALID_FORMAT, "", "converter not found"); }
         if (converter_missing) *converter_missing = false;
         if (!map) mapavail = 0;
-        char *t = path;
+        GenoConverter **t = path;
         SString tmp;
         tmp = in.getGenes();
@@ -186 +175 @@
         for (; t <= ret; t++)
         {
-                GenoConverter *gk = (GenoConverter*)converters(*t);
+                GenoConverter *gk = *t;
                 tmp = gk->convert(tmp, mapavail ? &tmpmap : 0, using_checkpoints);
                 if (!tmp.len())
                 {
-                        string t = ssprintf("f%c->f%c conversion failed (%s)", gk->in_format, gk->out_format, gk->name);
-                        return Geno(0, 0, 0, t.c_str());
+                        string t = ssprintf("f%s->f%s conversion failed (%s)", gk->in_format.c_str(), gk->out_format.c_str(), gk->name);
+                        return Geno("", Geno::INVALID_FORMAT, "", t.c_str());
                 }
                 if (mapavail)