Changeset 599 for mds-and-trees/mds_plot.py

Timestamp:

08/25/16 17:48:45 (8 years ago)

Author:

oriona

Message:

Function for computing variances removed.

File:

• mds-and-trees/mds_plot.py (modified) (2 diffs)

mds-and-trees/mds_plot.py

@@ -77 +77 @@
 def compute_mds(distance_matrix, dim):
         embed, evals = cmdscale(distance_matrix)
-        variances = compute_variances(embed)
+        variances = [np.var(embed[:,i]) for i in range(len(embed[0]))]
         embed = np.asarray([embed[:,i] for i in range(dim)]).T
 
@@ -85 +85 @@
 
         return embed
-
-
-def compute_variances(embed):
-        variances = []
-        for i in range(len(embed[0])):
-                variances.append(np.var(embed[:,i]))
-        return variances