Changeset 599 for mdsandtrees/mds_plot.py
 Timestamp:
 08/25/16 17:48:45 (7 years ago)
 File:

 1 edited
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mdsandtrees/mds_plot.py
r598 r599 77 77 def compute_mds(distance_matrix, dim): 78 78 embed, evals = cmdscale(distance_matrix) 79 variances = compute_variances(embed)79 variances = [np.var(embed[:,i]) for i in range(len(embed[0]))] 80 80 embed = np.asarray([embed[:,i] for i in range(dim)]).T 81 81 … … 85 85 86 86 return embed 87 88 89 def compute_variances(embed):90 variances = []91 for i in range(len(embed[0])):92 variances.append(np.var(embed[:,i]))93 return variances94 87 95 88
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