Changeset 196 for cpp/frams/genetics/f4/conv_f4.h

Timestamp:

03/25/14 03:22:37 (10 years ago)

Author:

Maciej Komosinski

Message:

Updated f4 sources and made f4 available for GDK demo apps

Location:

cpp/frams/genetics/f4

Files:

• . (added)
• conv_f4.h (moved) (moved from cpp/_old/f4/conv_f4.h) (1 diff)

cpp/frams/genetics/f4/conv_f4.h

@@ -1 @@
-/**
- *  conv_f4.h - f4 conversion functions.
- *
- *  f4genotype - f4 format genotype conversions for FramSticks
- *
- *  Copyright (C) 1999,2000  Adam Rotaru-Varga (adam_rotaru@yahoo.com)
- *  Copyright (C) 2001-2003  Maciej Komosinski
- *
- *  This library is free software; you can redistribute it and/or
- *  modify it under the terms of the GNU Lesser General Public
- *  License as published by the Free Software Foundation; either
- *  version 2.1 of the License, or (at your option) any later version.
- *
- *  This library is distributed in the hope that it will be useful,
- *  but WITHOUT ANY WARRANTY; without even the implied warranty of
- *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
- *  Lesser General Public License for more details.
- *
- *  You should have received a copy of the GNU Lesser General Public
- *  License along with this library; if not, write to the Free Software
- *  Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA 02111-1307 USA
- *
- */
+// This file is a part of the Framsticks GDK.
+// Copyright (C) 2002-2014  Maciej Komosinski and Szymon Ulatowski.  See LICENSE.txt for details.
+// Refer to http://www.framsticks.com/ for further information.
+
+// Copyright (C) 1999,2000  Adam Rotaru-Varga (adam_rotaru@yahoo.com), GNU LGPL
+// Copyright (C) since 2001 Maciej Komosinski
 
 #ifndef _CONV_F4_H_
 #define _CONV_F4_H_
 
-#include "model.h"
-#include "modelparts.h"
-#include "genoconv.h"
+#include <frams/model/model.h>
+#include <frams/model/modelparts.h>
+#include <frams/genetics/genoconv.h>
 #include "f4_general.h"
 
 
 // The f4->f0 converter
-class GenoConv_F40: public GenoConverter
+class GenoConv_f40 : public GenoConverter
 {
- public:
-  GenoConv_F40();
-  SString convert(SString &in, MultiMap * map);
+public:
+        GenoConv_f40();
+        SString convert(SString &in, MultiMap * map);
 };
 
 
 // a test-only f4->f1 converter, approximates only
-class GenoConv_F41_TestOnly: public GenoConverter
+class GenoConv_F41_TestOnly : public GenoConverter
 {
- public:
-  GenoConv_F41_TestOnly();
-  SString convert(SString &in, MultiMap * map);
+public:
+        GenoConv_F41_TestOnly();
+        SString convert(SString &in, MultiMap * map);
 };
 
 
 // A Model descendant, which support build from an f4 genotype.
-class f4_Model: public Model
+class f4_Model : public Model
 {
- public:
-  f4_Model();
-  ~f4_Model();
-  int      buildFromF4(SString &geno);
-  void     toF1Geno(SString &out);       // output to f1 format, approximation
- private:
-  f4_Cells * cells;
-  int        buildModelRec(f4_Cell * ndad);
-  /**
-   * Get a cell which is a stick, by traversing dadlinks.
-   */
-  f4_Cell *  getStick(f4_Cell * C);
-  int        error;
-  int        errorpos;
+public:
+        f4_Model();
+        ~f4_Model();
+        int      buildFromF4(SString &geno);
+        void     toF1Geno(SString &out);       // output to f1 format, approximation
+private:
+        f4_Cells * cells;
+        int        buildModelRec(f4_Cell * ndad);
+        /**
+         * Get a cell which is a stick, by traversing dadlinks.
+         */
+        f4_Cell *  getStick(f4_Cell * C);
+        int        error;
+        int        errorpos;
 };
 
 
 #endif
-