Changeset 107 for java/main/src/test/resources

Timestamp:

09/23/13 18:54:07 (11 years ago)

Author:

psniegowski

Message:

HIGHLIGHTS:

• add SimultorProviders? hierarchy
• start Framsticks server over SSH
• FJF compatible with Framsticks 4.0rc3
• reading and writing of standard.expt
• a proof-of-concept implementation of StandardExperiment?

CHANGELOG:
Optionally return FreeAccess? from registry.

Add SimulatorRange?.

StandardExperiment? with genotypes circulation.

Automate registration around StandardState?.

More improvements to StandardExperiment?.

Skeleton version of StandardExperiment?.

Test saving of StandardState?.

Standard experiment state is being loaded.

More development towards StandardState? reading.

Work on reading standard experiment state.

Add classes for standard experiment.

Update example standard.expt

Add FreeAccess? and FreeObject?.

Made compatible with version 4.0rc3

Change deserialization policy.

Improve SSH support.

Working running simulator over SSH.

Fix joining bug in Experiment.

Working version of SimulatorRunner?.

Add more SimulatorProviders?.

Working PrimeExperimentTest? with 4.0rc3

Add references to deserialization.

Add OpaqueObject? and it's serialization.

Add deserialization of dictionaries.

Partial implementation of deserialization.

Add more tests for deserialization.

Prepare tests for deserialization.

Add proper result to prime experiment test.

Minor fixes to simulators providers.

Draft version of SimulatorProvider?.

Add SimulatorProvider? interface.

Location:

java/main/src/test/resources

Files:

• configs/PrimeExperimentTest.xml (modified) (1 diff)
• configs/StandardExperimentTest.xml (added)
• info/GenePool.info (deleted)
• info/Population.info (deleted)
• log4j2.xml (modified) (2 diffs)
• netfiles/standard.expt (modified) (13 diffs)
• netfiles/standard_without_orgs.expt (added)

java/main/src/test/resources/configs/PrimeExperimentTest.xml

@@ -2 +2 @@
 <Framsticks>
         <import class="com.framsticks.test.PrimeExperiment" />
-        <import class="com.framsticks.experiment.Simulator" />
-        <import class="com.framsticks.util.dispatching.StackedJoinable" />
-        <import class="com.framsticks.util.dispatching.JoinableCollection" />
-        <import class="com.framsticks.running.LoggingOutputListener" />
-        <import class="com.framsticks.running.FramsServer" />
         <import class="com.framsticks.experiment.SimulatorConnector" />
-        <StackedJoinable interval="1">
-                <JoinableCollection name="servers">
-                        <FramsServer name="frams" port="9100" expdef="prime">
-                                <LoggingOutputListener />
-                        </FramsServer>
-                        <FramsServer name="frams" port="9101" expdef="prime">
-                                <LoggingOutputListener />
-                        </FramsServer>
-                </JoinableCollection>
-                <PrimeExperiment>
-                        <SimulatorConnector address="localhost:9100" />
-                        <SimulatorConnector address="localhost:9101" />
-                </PrimeExperiment>
-        </StackedJoinable>
+        <import class="com.framsticks.experiment.SimulatorGroup" />
+        <import class="com.framsticks.experiment.SimulatorRunner" />
+        <import class="com.framsticks.experiment.SimulatorRange" />
+        <PrimeExperiment>
+                <SimulatorRange hosts='@Serialized:["localhost"]' ports='@Serialized:[9100,9101,9102]' run="true"/>
+                <!-- <SimulatorGroup> -->
+                <!--    <SimulatorRunner address="localhost:9100" /> -->
+                <!--    <SimulatorRunner address="localhost:9101" /> -->
+                <!--    <SimulatorRunner address="localhost:9102" /> -->
+                <!-- </SimulatorGroup> -->
+        </PrimeExperiment>
 </Framsticks>

java/main/src/test/resources/log4j2.xml

@@ -9 +9 @@
                 <logger name="com.framsticks" level="info" />
                 <logger name="com.framsticks.test.TestConfiguration" level="info" />
+                <logger name="com.framsticks.standard" level="debug" />
+                <!-- <logger name="com.framsticks.experiment" level="debug" /> -->
+                <!-- <logger name="com.framsticks.test.PrimeExperiment" level="debug" /> -->
 
                 <!-- <logger name="com.framsticks.running.ExternalProcess" level="debug" /> -->
@@ -15 +18 @@
                 <!-- <logger name="com.framsticks.experiment.NetLoadSaveLogic" level="debug" /> -->
                 <!-- <logger name="com.framsticks.experiment.WorkPackageLogic" level="debug" /> -->
-                <!-- <logger name="com.framsticks.params.AccessOperations" level="debug" /> -->
+                <!-- <logger name="com.framsticks.params.AccessOperations" level="trace" /> -->
                 <!-- <logger name="com.framsticks.util.dispatching.AbstractJoinable" level="debug" /> -->
                 <!-- <logger name="com.framsticks.util.dispatching.AbstractJoinable.Report" level="info" /> -->

java/main/src/test/resources/netfiles/standard.expt

@@ -5 +5 @@
 overwrite:1
 filecomm:1
+lastCheckpoint:@Serialized:165
 createrr:1
 creatwarnfail:0
@@ -11 +12 @@
 groupchk:0
 resetonexpdef:1
+user:@Serialized:null
+identity:-1
 initialgen:X
 capacity:200
@@ -17 +20 @@
 rotation:0
 creath:0.1
-p_nop:20
+p_nop:20.0
 evalcount:0
-p_mut:64
-p_xov:16
-xov_mins:0
+p_mut:64.0
+p_xov:16.0
+xov_mins:0.0
 selrule:2
 delrule:0
-cr_c:0
-cr_life:0
-cr_v:1
-cr_gl:0
-cr_joints:0
-cr_nnsiz:0
-cr_nncon:0
-cr_di:0
-cr_vpos:0
-cr_vvel:0
+cr_c:0.0
+cr_life:0.0
+cr_v:1.0
+cr_gl:0.0
+cr_joints:0.0
+cr_nnsiz:0.0
+cr_nncon:0.0
+cr_di:0.0
+cr_vpos:0.0
+cr_vvel:0.0
 cr_norm:0
 cr_simi:0
-Energy0:5000
-e_meta:1
+Energy0:5000.0
+e_meta:1.0
 feed:0
-feede0:200
+feede0:200.0
 foodgen:
-feedtrans:1
+feedtrans:1.0
 aging:0
 stagnation:0
-minfitness:0
+minfitness:0.0
 boostphase:1
 makesound:0
@@ -50 +53 @@
 log:0
 notes:
-totaltestedcr:36
-totaltests:36
+totaltestedcr:165
+totaltests:165
 wrldtyp:0
-wrldsiz:20
+wrldsiz:20.0
 wrldmap:
-wrldwat:-1
+wrldwat:-1.0
 wrldbnd:0
-wrldg:1
+wrldg:1.0
 simtype:0
-nnspeed:1
+nnspeed:1.0
 odeshape:0
 odestep:0.05
-odemusclemin:0
-odemusclemax:10
-odemusclespeed:1
+odemusclemin:0.0
+odemusclemax:10.0
+odemusclespeed:1.0
 odeairdrag:0.01
 odewaterdrag:0.5
-odewaterbuoy:1
+odewaterbuoy:1.0
 odeseed:0
 odesepsticks:0
@@ -73 +76 @@
 odeworldcfm:1e-05
 odecolmumin:0.1
-odecolmumax:5
+odecolmumax:5.0
 odecolbounce:0.1
 odecolbouncevel:0.01
-odecolsoftcfm:0
-odecolsofterp:0
+odecolsoftcfm:0.0
+odecolsofterp:0.0
 odecol2mumin:0.1
-odecol2mumax:1
+odecol2mumax:1.0
 odecol2bounce:0.1
 odecol2bouncevel:0.01
-odecol2softcfm:0
-odecol2softerp:0
+odecol2softcfm:0.0
+odecol2softerp:0.0
 gen_hilite:1
 gen_extmutinfo:0
@@ -123 +126 @@
 f0_nodel_tag:1
 f0_nomod_tag:1
-f0_p_new:5
-f0_p_del:5
-f0_p_swp:10
-f0_p_pos:10
-f0_p_mas:10
-f0_p_frc:10
-f0_p_ing:10
-f0_p_asm:10
-f0_p_vsiz:0
-f0_j_new:5
-f0_j_del:5
-f0_j_stm:10
-f0_j_stf:10
-f0_j_rsf:10
-f0_j_vred:0
-f0_j_vgrn:0
-f0_j_vblu:0
-f0_n_new:5
-f0_n_del:5
-f0_n_prp:10
-f0_c_new:5
-f0_c_del:5
-f0_c_wei:10
+f0_p_new:5.0
+f0_p_del:5.0
+f0_p_swp:10.0
+f0_p_pos:10.0
+f0_p_mas:10.0
+f0_p_frc:10.0
+f0_p_ing:10.0
+f0_p_asm:10.0
+f0_p_vsiz:0.0
+f0_j_new:5.0
+f0_j_del:5.0
+f0_j_stm:10.0
+f0_j_stf:10.0
+f0_j_rsf:10.0
+f0_j_vred:0.0
+f0_j_vgrn:0.0
+f0_j_vblu:0.0
+f0_n_new:5.0
+f0_n_del:5.0
+f0_n_prp:10.0
+f0_c_new:5.0
+f0_c_del:5.0
+f0_c_wei:10.0
 f1_xo_propor:0
 f1_smX:0.05
@@ -155 +158 @@
 f1_nmConn:0.1
 f1_nmProp:0.1
-f1_nmWei:1
+f1_nmWei:1.0
 f1_nmVal:0.05
 f2_mutAddOper:0.4
@@ -173 +176 @@
 f3_xovGeneTransfer:0.8
 f3_xovCrossingOver:0.2
-f4_mut_add:50
-f4_mut_add_div:20
-f4_mut_add_conn:15
-f4_mut_add_neupar:5
-f4_mut_add_rep:10
-f4_mut_add_simp:50
-f4_mut_del:20
-f4_mut_mod:30
+f4_mut_add:50.0
+f4_mut_add_div:20.0
+f4_mut_add_conn:15.0
+f4_mut_add_neupar:5.0
+f4_mut_add_rep:10.0
+f4_mut_add_simp:50.0
+f4_mut_del:20.0
+f4_mut_mod:30.0
 genkonw0:1
 genkonw1:1
@@ -187 +190 @@
 genkonw4:1
 randinit:0.01
-nnoise:0
-touchrange:1
-bnoise_struct:0
-bnoise_vel:0
+nnoise:0.0
+touchrange:1.0
+bnoise_struct:0.0
+bnoise_vel:0.0
 ncl_N:1
 ncl_Nu:1
@@ -222 +225 @@
 ncl_SeeLight2:1
 simil_method:0
-simil_parts:0
-simil_partdeg:1
+simil_parts:0.0
+simil_partdeg:1.0
 simil_neuro:0.5
 symPosSteps:10
 symAlphaSteps:20
 symBetaSteps:20
-minjoint:0
-maxjoint:2
+minjoint:0.0
+maxjoint:2.0
 
 GenePool:
@@ -235 +238 @@
 fitness:return 0.0+this.velocity*1.0;
 fitfun:0
-fitm:2
-fitma:2
-
-org:
+fitm:2.0
+fitma:2.0
+
+Genotype:
 name:Uwuwit Si
 genotype:X
 info:
 num:1
-gnum:50
-popsiz:4
-lifespan:5000
-velocity:0
-distance:0
-vertvel:0
+gnum:0
+popsiz:6
+lifespan:5000.0
+velocity:0.0
+distance:0.0
+vertvel:0.0
 vertpos:-0.01
-user1:null
-user2:null
-user3:null
-uid:g6501
-
-org:
-name:Igoras Sy
-genotype:X[*]
-info:300.00% mutation of 'Uwuwit Si'
+user1:@Serialized:null
+user2:@Serialized:"2"
+user3:@Serialized:null
+uid:g1
+
+Genotype:
+name:Ezupan Si
+genotype:cX
+info:100.00% mutation of 'Uwuwit Si'
 num:2
-gnum:51
-popsiz:3
-lifespan:5000
-velocity:0
-distance:0
-vertvel:0
+gnum:1
+popsiz:2
+lifespan:5000.0
+velocity:0.0
+distance:0.0
+vertvel:0.0
 vertpos:-0.01
-user1:null
-user2:null
-user3:null
-uid:g6502
-
-org:
-name:Emofuf Sy
-genotype:wX[*]
-info:25.00% mutation of 'Igoras Sy'
+user1:@Serialized:null
+user2:@Serialized:null
+user3:@Serialized:null
+uid:g2
+
+Genotype:
+name:Omygut Sy
+genotype:cX[@]
+info:150.00% mutation of 'Ezupan Si'
 num:3
-gnum:52
-popsiz:3
-lifespan:5000
-velocity:0
-distance:0
-vertvel:0
+gnum:2
+popsiz:1
+lifespan:5000.0
+velocity:0.0
+distance:0.0
+vertvel:0.0
 vertpos:-0.01
-user1:null
-user2:null
-user3:null
-uid:g6503
+user1:@Serialized:null
+user2:@Serialized:null
+user3:@Serialized:null
+uid:g3
 
 Population:
@@ -304 +307 @@
 bodysim:1
 selfcol:0
-em_stat:0
-em_dyn:0
-en_assim:0
+em_stat:0.0
+em_dyn:0.0
+en_assim:0.0
 
 Population:
@@ -323 +326 @@
 bodysim:1
 selfcol:0
-em_stat:0
-em_dyn:0
-en_assim:0
-
+em_stat:0.0
+em_dyn:0.0
+en_assim:0.0
+