source: java/main/src/main/java/com/framsticks/model/Genotype.java @ 193

package com.framsticks.model;

import com.framsticks.params.annotations.FramsClassAnnotation;
import com.framsticks.params.annotations.ParamAnnotation;


// import org.apache.logging.log4j.Logger;

@FramsClassAnnotation
public class Genotype extends Model {
        // private final static Logger log = LogManager.getLogger(Genotype.class);

        @ParamAnnotation
        public String name;

        @ParamAnnotation
        public String genotype;

        @ParamAnnotation
        public String info;

        @ParamAnnotation(id = "simi")
        public double similarity;

        @ParamAnnotation(id = "numconnections")
        public double brainConnections;

        @ParamAnnotation(id = "num")
        public int ordinalNumber;

        @ParamAnnotation(id = "gnum")
        public int generation;

        @ParamAnnotation
        public int instances;

        @ParamAnnotation(id = "lifespan")
        public double lifeSpan;

        @ParamAnnotation
        public double velocity;

        @ParamAnnotation
        public double distance;

        @ParamAnnotation(id = "vertvel")
        public double verticalVelocity;

        @ParamAnnotation(id = "vertpos")
        public double verticalPosition;

        @ParamAnnotation(id = "fit")
        public double fitness;

        @ParamAnnotation(id = "fit2")
        public double finalFitness;

        @ParamAnnotation(id = "f0genotype")
        public String genotypeInF0;

        @ParamAnnotation(id = "convtrace1")
        public String conversionBacktrace;

        @ParamAnnotation
        public boolean isValid;

        public Object[] userFields = new Object[3];
        @ParamAnnotation
        public Object getUser1() { return userFields[0]; }
        @ParamAnnotation
        public void setUser1(Object user1) { userFields[0] = user1; }

        @ParamAnnotation
        public Object getUser2() { return userFields[1]; }
        @ParamAnnotation
        public void setUser2(Object user2) { userFields[1] = user2; }

        @ParamAnnotation
        public Object getUser3() { return userFields[2]; }
        @ParamAnnotation
        public void setUser3(Object user3) { userFields[2] = user3; }

        @ParamAnnotation
        public String uid;

        @ParamAnnotation
        public double getStrsiz() { return getNumparts(); }
        @ParamAnnotation
        public void setStrsiz(double strsiz) {}


        @ParamAnnotation
        public double getStrjoints() { return getNumjoints(); }
        @ParamAnnotation
        public void setStrjoints(double strjoints) {}


        @ParamAnnotation
        public double getNnsiz() { return getNumneurons(); }
        @ParamAnnotation
        public void setNnsiz(double nnsiz) {}


        @ParamAnnotation
        public double getNncon() { return brainConnections; }
        @ParamAnnotation
        public void setNncon(double nncon) { this.brainConnections = nncon; }

        @ParamAnnotation
        public int getPopsiz() { return instances; }
        @ParamAnnotation
        public void setPopsiz(int popsiz) { this.instances = popsiz; }

        @Override
        public String toString() {
                return name;
        }

}