source: java/main/src/main/java/com/framsticks/model/F0Genotype.java @ 78

package com.framsticks.model;

import com.framsticks.util.Casting;
import com.framsticks.util.Containers;
import org.apache.log4j.Logger;

import java.util.ArrayList;
import java.util.Iterator;
import java.util.List;

/**
 * Author: Piotr Śniegowski
 */
public class F0Genotype {

        private final static Logger LOGGER = Logger.getLogger(F0Genotype.class);

        public Double startingEnergy;
        public Double getEnerg0() { return startingEnergy; }
        public void setEnerg0(Double energ0) { startingEnergy = energ0; }

        public Double getSe() { return startingEnergy; }
        public void setSe(Double se) { startingEnergy = se; }

        /** Vstyle */
        public String visualizationStyle;
        public String getVstyle() { return visualizationStyle; }
        public void setVstyle(String Vstyle) { visualizationStyle = Vstyle; }

        public final List<Part> parts = new ArrayList<Part>();
        public final List<Joint> joints = new ArrayList<Joint>();
        public final List<NeuroDef> neurodefs = new ArrayList<NeuroDef>();

        public Double getNumparts() { return (double)parts.size(); }
        public Double getNumjoints() { return (double)joints.size(); }
        public Double getNumneurons() { return (double)neurodefs.size(); }

        //this is impossible to use, because numparts field is marked as readonly
        public void setNumparts(Double numparts) { Containers.resizeList(parts, (int) (double) numparts); }
        public void setNumjoints(Double numjoints) { Containers.resizeList(joints, (int)(double)numjoints); }
        public void setNumneurons(Double numneurons) { Containers.resizeList(neurodefs, (int)(double)numneurons); }

        public List<Part> getParts() { return parts; }
        public List<Joint> getJoints() { return joints; }
        public List<NeuroDef> getNeuroDefs() { return neurodefs; }

        public static F0Genotype build(List<Object> objects) {
                Iterator<Object> i = objects.iterator();
                if (!i.hasNext()) {
                        return null;
                }
                F0Genotype f0Genotype = Casting.tryCast(F0Genotype.class, i.next());
                if (f0Genotype == null) {
                        LOGGER.fatal("first object is not a Model");
                        return null;
                }
                while (i.hasNext()) {
                        Object object = i.next();
                        if (object instanceof Joint) {
                                f0Genotype.joints.add((Joint)object);
                                continue;
                        }
                        if (object instanceof Part) {
                                f0Genotype.parts.add((Part)object);
                                continue;
                        }
                        if (object instanceof NeuroDef) {
                                f0Genotype.neurodefs.add((NeuroDef) object);
                                continue;
                        }
                        LOGGER.error("invalid class: " + object.getClass().getCanonicalName());
                }
                return f0Genotype;
        }
}