source: framspy/framsfiles/tests/reader_tests.py @ 1236

Last change on this file since 1236 was 1104, checked in by Maciej Komosinski, 4 years ago

Added the "framsfiles" module for reading and writing Framsticks-format files (genotypes, settings, scrips, neurons, etc.)

File size: 6.5 KB
Line 
1#!/usr/bin/env python3
2import unittest
3from parameterized import parameterized
4import os
5import json
6import re
7import glob
8
9from ..reader import loads, load, parse_value
10
11test_files_root = "test_files"
12input_files_root = os.path.join(os.path.dirname(os.path.abspath(__file__)), test_files_root, "inputs")
13output_files_root = os.path.join(os.path.dirname(os.path.abspath(__file__)), test_files_root, "outputs")
14input_files = glob.glob(os.path.join(input_files_root, '*', '*'))
15
16parse_value_testcases = [
17    ('1', 1),
18    ('0', 0),
19    ('a', 'a'),
20    # TODO tilde should also be escaped in single-line values (now it is only escaped in multi-line values)
21    ('generic string ~ with tylda', 'generic string ~ with tylda'),
22    ('123', 123),
23    ('0x123', 0x123),
24    ('0X123', 0x123),
25    ('+0X10', 16),
26    ('-0x125', -0x125),
27    ('-0xaa', -0xaa),
28    ('0xaa', 0xaa),
29    ('0xAA', 0xaa),
30    ('-12.3', -12.3),
31    ('12.3e+05', 12.3e+05),
32    ('@Serialized:null', None),
33    ('@Serialized: null', None),
34    ('@Serialized:"@Serialized:"', '@Serialized:'),
35    ('@Serialized:"\\""', '"'),
36    ('@Serialized:"\\t"', '\t'),
37    ('@Serialized:"\\n"', '\n'),
38    ('@Serialized:1', 1),
39    ('@Serialized:2.1', 2.1),
40    ('@Serialized:+2.1', 2.1),
41    ('@Serialized:-2.1', -2.1),
42    ('@Serialized: +0X10  ', 16),
43    ('@Serialized: 0X10  ', 16),
44    ('@Serialized: 0XAA  ', 0xaa),
45    ('@Serialized: 0Xaa  ', 0xaa),
46    ('@Serialized:[]', []),
47    ('@Serialized:[1,2,3]', [1, 2, 3]),
48    ('@Serialized: [ +0X10 ] ', [16]),
49    ('@Serialized:[ +0X10, null, "abc"] ', [16, None, "abc"]),
50    ('@Serialized:[[[]]]', [[[]]]),
51    ('@Serialized:{}', {}),
52    ('@Serialized:{"a":123 }', {"a": 123}),
53    ('@Serialized:{"a":123,"b":2 }', {"a": 123, "b": 2}),
54    ('@Serialized:{"a":123,"b":[1,2,3] }', {"a": 123, "b": [1, 2, 3]}),
55    ('@Serialized:XYZ[0,1,2]', (0, 1, 2)),
56    ('@Serialized:Population<0x85f53a8>', 'Population<0x85f53a8>'),
57    ('@Serialized:CrazyObject[{},{},[[]]]', 'CrazyObject[{},{},[[]]]'),
58    ('@Serialized:[co[{},{},[[]]],[]]', ['co[{},{},[[]]]', []]),
59    ('@Serialized:[co[{},{},[[]]],[1,2,3]]', ['co[{},{},[[]]]', [1, 2, 3]]),
60    ('@Serialized:[[1,2, 3],  co[{},{},[[]]]]', [[1, 2, 3], 'co[{},{},[[]]]']),
61    # TODO maybe raise if there is a space?
62    ('@Serialized:Population <0x85f53a8>', 'Population <0x85f53a8>'),
63
64]
65context_parse_value_testcases = [
66    ({'value': '1', 'classname': 'expdef', 'key': 'name', 'context': 'expdef file'}, '1'),
67    ({'value': '234.5', 'classname': 'Creature', 'key': 'energ0', 'context': 'Global Context'}, 234.5)
68]
69parse_value_exception_testcases = [
70    '@Serialized:   '
71]
72
73loads_testcases = [
74    ('class:\nmlprop:~\nbla bla bla\n~\n', [{"_classname": "class", "mlprop": "bla bla bla\n"}]),
75    ('class:\nmlprop:~\n\\~\n~\n', [{"_classname": "class", "mlprop": "~\n"}])
76]
77loads_exception_testcases = [
78    'class:\nmlprop:~\n\\~\n~\nasdasd',
79    'class:\nmlprop:~\n~\n~\n',
80]
81
82
83# TODO make more atomic tests, maybe
84class ReferenceTest(unittest.TestCase):
85    def test0(self):
86        str_in = '@Serialized:[^0] '
87        result = parse_value(str_in)
88        self.assertTrue(isinstance(result, list))
89        self.assertEqual(len(result), 1)
90        self.assertTrue(result is result[0])
91
92    def test1(self):
93        str_in = '@Serialized:[44,[^1]]'
94        result = parse_value(str_in)
95        self.assertTrue(isinstance(result, list))
96        self.assertEqual(len(result), 2)
97        self.assertEqual(result[0], 44)
98        self.assertTrue(result[1] is result[1][0])
99
100    def test2(self):
101        str_in = '@Serialized:[[100],["abc"],[300,^2]]'
102        result = parse_value(str_in)
103        self.assertTrue(isinstance(result, list))
104        self.assertEqual(len(result), 3)
105        self.assertEqual(result[0], [100])
106        self.assertEqual(result[1], ["abc"])
107        self.assertEqual(result[2][0], 300)
108        self.assertTrue(result[2][1] is result[1])
109
110    def test3(self):
111        str_in = '@Serialized:[[123,[]],["x",^0],^2]'
112        result = parse_value(str_in)
113        self.assertTrue(isinstance(result, list))
114        self.assertEqual(len(result), 3)
115        self.assertEqual(result[0], [123, []])
116        self.assertTrue(isinstance(result[1], list))
117        self.assertEqual(result[1][0], "x")
118        self.assertTrue(result[2] is result[0][1])
119        self.assertTrue(result[1][1] is result)
120
121    def test4(self):
122        str_in = '@Serialized:{"a":[33,44],"b":^1,"c":[33,44]}'
123        result = parse_value(str_in)
124        self.assertTrue(isinstance(result, dict))
125        self.assertEqual(len(result), 3)
126        self.assertListEqual(sorted(result.keys()), ["a", "b", "c"])
127
128        self.assertEqual(result["a"], [33, 44])
129        self.assertEqual(result["c"], [33, 44])
130
131        self.assertFalse(result["c"] is result["a"])
132        self.assertTrue(result["b"], result["a"])
133
134    def test5(self):
135        str_in = '@Serialized:[null, null, [1, 2], null, ^ 1]'
136        result = parse_value(str_in)
137        self.assertTrue(isinstance(result, list))
138        self.assertEqual(len(result), 5)
139        self.assertListEqual(result[0:4], [None, None, [1, 2], None])
140        self.assertTrue(result[2] is result[4])
141
142
143class ParseValueTest(unittest.TestCase):
144    @parameterized.expand(parse_value_testcases)
145    def test_correct_parsing(self, input_val, output):
146        self.assertEqual(output, parse_value(input_val))
147
148    @parameterized.expand(context_parse_value_testcases)
149    def test_correct_context_parsing(self, input_val, output):
150        self.assertEqual(output, parse_value(**input_val))
151
152    @parameterized.expand(parse_value_exception_testcases)
153    def test_parsing_exceptions(self, input_val):
154        self.assertRaises(ValueError, parse_value, input_val)
155
156
157class LoadsTest(unittest.TestCase):
158    @parameterized.expand(loads_testcases)
159    def test_correct_loads(self, input_val, output):
160        self.assertEqual(output, loads(input_val))
161
162    @parameterized.expand(loads_exception_testcases)
163    def test_load_exceptions(self, input_val):
164        self.assertRaises(ValueError, loads, input_val)
165
166
167class LoadTest(unittest.TestCase):
168    @parameterized.expand(input_files)
169    def test_correct_load(self, filename):
170        json_output_path = output_files_root + filename[len(input_files_root):] + ".json"
171        with self.subTest(i=filename):
172            result = load(filename)
173            with open(json_output_path, encoding='UTF-8') as json_file:
174                correct = json.load(json_file)
175                self.assertEqual(len(result), len(correct))
176                for r, c in zip(result, correct):
177                    self.assertDictEqual(r, c)
178
179
180if __name__ == '__main__':
181    unittest.main()
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