| [3] | 1 | <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.0 Transitional//EN"> |
|---|
| 2 | <html><head><meta http-equiv="Content-Type" content="text/html;charset=iso-8859-1"> |
|---|
| 3 | <title>Geno_ftest class Reference</title> |
|---|
| 4 | <link href="doxygen.css" rel="stylesheet" type="text/css"> |
|---|
| 5 | </head><body> |
|---|
| 6 | <!-- Generated by Doxygen 1.2.17 --> |
|---|
| 7 | <center> |
|---|
| 8 | <a class="qindex" href="index.html">Main Page</a> <a class="qindex" href="hierarchy.html">Class Hierarchy</a> <a class="qindex" href="annotated.html">Compound List</a> <a class="qindex" href="files.html">File List</a> <a class="qindex" href="functions.html">Compound Members</a> <a class="qindex" href="globals.html">File Members</a> </center> |
|---|
| 9 | <hr><h1>Geno_ftest Class Reference</h1>A sample class for genetic operations on DNA-like genotypes. |
|---|
| 10 | <a href="#_details">More...</a> |
|---|
| 11 | <p> |
|---|
| 12 | <p>Inheritance diagram for Geno_ftest: |
|---|
| 13 | <p><center><img src="classGeno__ftest.png" usemap="#Geno_ftest_map" border="0" alt=""></center> |
|---|
| 14 | <map name="Geno_ftest_map"> |
|---|
| 15 | <area href="classGeno__fx.html" alt="Geno_fx" shape="rect" coords="0,0,72,24"> |
|---|
| 16 | </map> |
|---|
| 17 | <a href="classGeno__ftest-members.html">List of all members.</a><table border=0 cellpadding=0 cellspacing=0> |
|---|
| 18 | <tr><td></td></tr> |
|---|
| 19 | <tr><td colspan=2><br><h2>Public Methods</h2></td></tr> |
|---|
| 20 | <tr><td nowrap align=right valign=top><a name="a0" doxytag="Geno_ftest::Geno_ftest"></a> |
|---|
| 21 | </td><td valign=bottom><b>Geno_ftest</b> ()</td></tr> |
|---|
| 22 | <tr><td nowrap align=right valign=top><a name="a1" doxytag="Geno_ftest::checkValidity"></a> |
|---|
| 23 | int </td><td valign=bottom><a class="el" href="classGeno__ftest.html#a1">checkValidity</a> (const char *)</td></tr> |
|---|
| 24 | <tr><td> </td><td><font size=-1><em>The only letters allowed are A,T,G,C.</em></font><br><br></td></tr> |
|---|
| 25 | <tr><td nowrap align=right valign=top><a name="a2" doxytag="Geno_ftest::validate"></a> |
|---|
| 26 | int </td><td valign=bottom><a class="el" href="classGeno__ftest.html#a2">validate</a> (char *&)</td></tr> |
|---|
| 27 | <tr><td> </td><td><font size=-1><em>Remove all invalid letters from the genotype.</em></font><br><br></td></tr> |
|---|
| 28 | <tr><td nowrap align=right valign=top><a name="a3" doxytag="Geno_ftest::mutate"></a> |
|---|
| 29 | int </td><td valign=bottom><a class="el" href="classGeno__ftest.html#a3">mutate</a> (char *&g, float &chg)</td></tr> |
|---|
| 30 | <tr><td> </td><td><font size=-1><em>Very simple mutation.</em></font><br><br></td></tr> |
|---|
| 31 | <tr><td nowrap align=right valign=top><a name="a4" doxytag="Geno_ftest::crossOver"></a> |
|---|
| 32 | int </td><td valign=bottom><a class="el" href="classGeno__ftest.html#a4">crossOver</a> (char *&g1, char *&g2, float &chg1, float &chg2)</td></tr> |
|---|
| 33 | <tr><td> </td><td><font size=-1><em>A simple one-point crossover.</em></font><br><br></td></tr> |
|---|
| 34 | <tr><td nowrap align=right valign=top><a name="a5" doxytag="Geno_ftest::style"></a> |
|---|
| 35 | unsigned long </td><td valign=bottom><a class="el" href="classGeno__ftest.html#a5">style</a> (const char *g, int pos)</td></tr> |
|---|
| 36 | <tr><td> </td><td><font size=-1><em>Applying some colors and font styles...</em></font><br><br></td></tr> |
|---|
| 37 | <tr><td nowrap align=right valign=top><a name="a6" doxytag="Geno_ftest::getSimplest"></a> |
|---|
| 38 | char * </td><td valign=bottom><b>getSimplest</b> ()</td></tr> |
|---|
| 39 | <tr><td colspan=2><br><h2>Public Attributes</h2></td></tr> |
|---|
| 40 | <tr><td nowrap align=right valign=top><a name="m0" doxytag="Geno_ftest::prob"></a> |
|---|
| 41 | double </td><td valign=bottom><b>prob</b></td></tr> |
|---|
| 42 | </table> |
|---|
| 43 | <hr><a name="_details"></a><h2>Detailed Description</h2> |
|---|
| 44 | A sample class for genetic operations on DNA-like genotypes. |
|---|
| 45 | <p> |
|---|
| 46 | <dl compact><dt><b>Author: </b></dt><dd> |
|---|
| 47 | Maciej Komosinski</dl>This is a very simple class to illustrate basic genetic operations. To compile this code, you may need some GDK files. For a more sophisticated example of Geno_f4 derived from <a class="el" href="classGeno__fx.html">Geno_fx</a>, refer to the available source on developmental encoding and f4 genotype format. |
|---|
| 48 | <p> |
|---|
| 49 | <dl compact><dt><b>See also: </b></dt><dd> |
|---|
| 50 | <a class="el" href="geno__ftest_8cpp.html#geno_ftest_example">geno_ftest_example</a> </dl> |
|---|
| 51 | <p> |
|---|
| 52 | <hr><address style="align: right;"><small>Generated on Sun Sep 15 00:58:40 2002 for Framsticks GenoFX by |
|---|
| 53 | <a href="http://www.doxygen.org/index.html"> |
|---|
| 54 | <img src="doxygen.png" alt="doxygen" align="middle" border=0 |
|---|
| 55 | width=110 height=53></a>1.2.17 </small></address> |
|---|
| 56 | </body> |
|---|
| 57 | </html> |
|---|
