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Last change
on this file since 61 was
3,
checked in by Maciej Komosinski, 16 years ago
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added geno_fx, a base class for genetic operations on genotypes
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File size:
1.1 KB
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| 1 | // This file is a part of Framsticks GenoFX library.
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| 2 | // Copyright (C) 2002-2009 Maciej Komosinski. See LICENSE.txt for details.
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| 3 | // Refer to http://www.framsticks.com/ for further information.
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| 4 |
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| 5 | #ifndef _GENO_FTEST_H_
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| 6 | #define _GENO_FTEST_H_
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| 7 |
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| 8 | #include "param.h"
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| 9 | #include "sstring.h"
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| 10 | #include "geno_fx.h"
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| 11 |
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| 12 | /** \file */
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| 13 |
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| 14 | ///A sample class for genetic operations on DNA-like genotypes
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| 15 | /**
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| 16 | \author Maciej Komosinski
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| 17 |
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| 18 | This is a very simple class to illustrate basic genetic operations.
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| 19 | To compile this code, you may need some GDK files.
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| 20 | For a more sophisticated example of Geno_f4 derived from Geno_fx, refer to
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| 21 | the available source on developmental encoding and f4 genotype format.
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| 22 |
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| 23 | \sa \ref geno_ftest_example
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| 24 | */
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| 25 |
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| 26 | class Geno_ftest : public Geno_fx
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| 27 | {
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| 28 | public:
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| 29 | Geno_ftest();
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| 30 | int checkValidity(const char *);
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| 31 | int validate(char *&);
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| 32 | int mutate(char *&g,float& chg);
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| 33 | int crossOver(char *&g1,char *&g2,float& chg1,float& chg2);
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| 34 | unsigned long style(const char *g, int pos);
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| 35 | char* getSimplest() {return "GTTCAGATC";}
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| 36 |
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| 37 | double prob;
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| 38 | };
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| 39 |
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| 40 | #endif
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| 41 |
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