1 | // This file is a part of the Framsticks GDK. |
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2 | // Copyright (C) 1999-2014 Maciej Komosinski and Szymon Ulatowski. See LICENSE.txt for details. |
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3 | // Refer to http://www.framsticks.com/ for further information. |
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4 | |
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5 | // Copyright (C) 1999,2000 Adam Rotaru-Varga (adam_rotaru@yahoo.com), GNU LGPL |
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6 | // Copyright (C) since 2001 Maciej Komosinski |
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7 | |
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8 | #include "conv_f4.h" |
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9 | #include <common/framsg.h> |
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10 | #include "../oper_fx.h" //for GENOPER_OK constant |
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11 | |
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12 | #ifdef DMALLOC |
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13 | #include <dmalloc.h> |
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14 | #endif |
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15 | |
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16 | |
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17 | GenoConv_f40::GenoConv_f40() |
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18 | { |
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19 | name = "Developmental encoding"; |
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20 | in_format = '4'; |
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21 | out_format = '0'; |
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22 | mapsupport = 1; |
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23 | } |
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24 | |
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25 | |
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26 | SString GenoConv_f40::convert(SString &in, MultiMap * map) |
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27 | { |
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28 | int res; |
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29 | f4_Model * model = new f4_Model(); |
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30 | res = model->buildFromF4(in); |
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31 | if (GENOPER_OK != res) return SString(); // oops |
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32 | if (NULL != map) |
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33 | // generate to-f0 conversion map |
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34 | model->getCurrentToF0Map(*map); |
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35 | SString out = model->getF0Geno().getGene(); |
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36 | delete model; |
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37 | return out; |
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38 | } |
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39 | |
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40 | |
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41 | GenoConv_F41_TestOnly::GenoConv_F41_TestOnly() |
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42 | { |
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43 | name = "test-only approximate f4 -> f1 converter"; |
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44 | in_format = '4'; |
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45 | out_format = '1'; |
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46 | mapsupport = 0; |
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47 | info = "This is for testing. Do not use in production! (adam)"; |
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48 | } |
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49 | |
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50 | |
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51 | SString GenoConv_F41_TestOnly::convert(SString &in, MultiMap * map) |
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52 | { |
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53 | int res; |
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54 | f4_Model * model = new f4_Model(); |
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55 | res = model->buildFromF4(in); |
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56 | if (GENOPER_OK != res) return SString(); // oops |
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57 | SString out; |
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58 | model->toF1Geno(out); |
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59 | delete model; |
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60 | return out; |
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61 | } |
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62 | |
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63 | |
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64 | f4_Model::f4_Model() : Model() |
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65 | { |
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66 | cells = NULL; |
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67 | } |
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68 | |
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69 | f4_Model::~f4_Model() |
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70 | { |
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71 | if (cells) delete cells; |
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72 | } |
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73 | |
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74 | int f4_Model::buildFromF4(SString &geno) |
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75 | { |
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76 | int i; |
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77 | |
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78 | error = GENOPER_OK; |
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79 | errorpos = -1; |
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80 | |
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81 | // build cells, and simulate |
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82 | if (cells) delete cells; |
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83 | cells = new f4_Cells(geno, 0); |
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84 | if (GENOPER_OK != cells->geterror()) |
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85 | { |
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86 | error = cells->geterror(); |
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87 | errorpos = cells->geterrorpos(); |
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88 | //delete cells; |
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89 | return error; |
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90 | } |
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91 | |
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92 | cells->simulate(); |
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93 | if (GENOPER_OK != cells->geterror()) |
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94 | { |
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95 | error = cells->geterror(); |
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96 | errorpos = cells->geterrorpos(); |
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97 | return error; |
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98 | } |
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99 | |
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100 | // reset recursive traverse flags |
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101 | for (i = 0; i < cells->nc; i++) |
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102 | cells->C[i]->recProcessedFlag = 0; |
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103 | |
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104 | open(); // begin model build |
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105 | |
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106 | // process every cell |
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107 | int res; |
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108 | for (i = 0; i < cells->nc; i++) |
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109 | { |
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110 | res = buildModelRec(cells->C[i]); |
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111 | if (res) |
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112 | { |
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113 | FramMessage("f4_Model", "buildModelRec", "Error in building Model", 2); |
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114 | error = res; |
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115 | break; |
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116 | } |
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117 | } |
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118 | |
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119 | res = close(); |
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120 | if (0 == res) // invalid |
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121 | error = -10; |
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122 | |
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123 | return error; |
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124 | } |
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125 | |
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126 | |
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127 | f4_Cell * f4_Model::getStick(f4_Cell * C) |
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128 | { |
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129 | if (T_STICK4 == C->type) return C; |
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130 | if (NULL != C->dadlink) |
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131 | return getStick(C->dadlink); |
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132 | // we have no more dadlinks, find any stick |
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133 | for (int i = 0; i < cells->nc; i++) |
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134 | if (cells->C[i]->type == T_STICK4) |
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135 | return cells->C[i]; |
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136 | // none! |
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137 | FramMessage("f4_Model", "getStick", "Not a single stick", 2); |
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138 | return NULL; |
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139 | } |
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140 | |
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141 | |
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142 | /// updated by Macko to follow new GDK standards (no more neuroitems) |
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143 | int f4_Model::buildModelRec(f4_Cell * C) |
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144 | { |
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145 | int partidx; |
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146 | int j, res; |
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147 | MultiRange range; |
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148 | |
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149 | if (C->recProcessedFlag) |
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150 | // already processed |
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151 | return 0; |
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152 | |
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153 | // mark it processed |
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154 | C->recProcessedFlag = 1; |
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155 | |
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156 | // make sure parent is a stick |
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157 | if (NULL != C->dadlink) |
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158 | if (C->dadlink->type != T_STICK4) |
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159 | { |
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160 | C->dadlink = getStick(C->dadlink); |
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161 | } |
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162 | |
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163 | // make sure its parent is processed first |
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164 | if (NULL != C->dadlink) |
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165 | { |
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166 | res = buildModelRec(C->dadlink); |
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167 | if (res) return res; |
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168 | } |
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169 | |
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170 | char tmpLine[100]; |
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171 | |
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172 | range = C->genoRange; |
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173 | if (C->type == T_STICK4) |
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174 | { |
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175 | int jj_p1_refno; // save for later |
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176 | // first end is connected to dad, or new |
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177 | if (C->dadlink == NULL) |
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178 | { |
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179 | // new part object for firstend |
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180 | // coordinates are left to be computed by Model |
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181 | sprintf(tmpLine, "p:m=1,fr=%g,ing=%g,as=%g", |
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182 | /*1.0/C->P.mass,*/ C->P.friction, C->P.ingest, C->P.assim |
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183 | //C->firstend.x, C->firstend.y, C->firstend.z |
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184 | ); |
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185 | partidx = singleStepBuild(tmpLine, &range); |
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186 | if (partidx < 0) return -1; |
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187 | jj_p1_refno = partidx; |
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188 | } |
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189 | else { |
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190 | // adjust mass/vol of first endpoint |
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191 | jj_p1_refno = C->dadlink->p2_refno; |
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192 | Part * p1 = getPart(jj_p1_refno); |
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193 | p1->mass += 1.0; |
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194 | // p1->volume += 1.0/C->P.mass; |
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195 | } |
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196 | // new part object for lastend |
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197 | sprintf(tmpLine, "p:m=1,fr=%g,ing=%g,as=%g", |
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198 | //C->lastend.x, C->lastend.y, C->lastend.z |
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199 | /*"vol=" 1.0/C->P.mass,*/ C->P.friction, C->P.ingest, C->P.assim |
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200 | ); |
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201 | partidx = singleStepBuild(tmpLine, &range); |
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202 | if (partidx < 0) return -2; |
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203 | C->p2_refno = partidx; |
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204 | |
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205 | // new joint object |
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206 | // check that the part references are valid |
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207 | int jj_p2_refno = C->p2_refno; |
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208 | if ((jj_p1_refno < 0) || (jj_p1_refno >= getPartCount())) return -11; |
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209 | if ((jj_p2_refno < 0) || (jj_p2_refno >= getPartCount())) return -12; |
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210 | sprintf(tmpLine, "j:p1=%ld,p2=%ld,dx=%g,dy=0,dz=0,rx=%g,ry=0,rz=%g"\ |
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211 | ",stam=%g", |
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212 | jj_p1_refno, jj_p2_refno, |
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213 | // relative position -- always (len, 0, 0), along the stick |
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214 | // this is optional! |
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215 | C->P.len, |
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216 | // relative rotation |
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217 | C->xrot, C->zrot, |
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218 | //C->P.ruch, // rotstif |
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219 | C->P.odpor |
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220 | ); |
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221 | partidx = singleStepBuild(tmpLine, &range); |
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222 | if (partidx < 0) return -13; |
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223 | C->joint_refno = partidx; |
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224 | } |
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225 | |
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226 | if (C->type == T_NEURON4) ///<this case was updated by MacKo |
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227 | { |
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228 | // new neuron object |
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229 | // it is linked to a part (not a joint!) |
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230 | int p_refno = C->dadlink->p2_refno; |
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231 | if ((p_refno < 0) || (p_refno >= getPartCount())) return -21; |
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232 | // joint_refno is currently not used |
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233 | sprintf(tmpLine, "n:p=%ld,d=\"N:in=%g,fo=%g,si=%g\"", |
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234 | p_refno, |
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235 | C->inertia, C->force, C->sigmo); |
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236 | partidx = singleStepBuild(tmpLine, &range); |
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237 | if (partidx < 0) return -22; |
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238 | C->neuro_refno = partidx; |
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239 | int n_refno = C->neuro_refno; |
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240 | |
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241 | if (C->ctrl) |
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242 | { |
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243 | if (1 == C->ctrl) |
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244 | sprintf(tmpLine, "n:j=%d,d=\"@:p=%g\"", C->dadlink->joint_refno, C->P.ruch); |
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245 | else |
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246 | sprintf(tmpLine, "n:j=%d,d=\"|:p=%g,r=%g\"", C->dadlink->joint_refno, C->P.ruch, C->mz); |
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247 | partidx = singleStepBuild(tmpLine, &range); |
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248 | if (partidx < 0) return -32; |
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249 | sprintf(tmpLine, "c:%d,%d", partidx, n_refno); |
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250 | if (singleStepBuild(tmpLine, &range) < 0) return -33; |
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251 | } |
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252 | |
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253 | for (j = 0; j < C->nolink; j++) |
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254 | { |
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255 | if (NULL != C->links[j]->from) |
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256 | buildModelRec(C->links[j]->from); |
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257 | |
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258 | tmpLine[0] = 0; |
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259 | if (1 == C->links[j]->t) sprintf(tmpLine, "n:p=%d,d=\"*\"", p_refno); |
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260 | if (2 == C->links[j]->t) sprintf(tmpLine, "n:j=%d,d=\"G\"", C->dadlink->joint_refno); |
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261 | if (3 == C->links[j]->t) sprintf(tmpLine, "n:p=%d,d=\"T\"", p_refno); |
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262 | if (4 == C->links[j]->t) sprintf(tmpLine, "n:p=%d,d=\"S\"", p_refno); |
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263 | int from = -1; |
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264 | if (tmpLine[0]) //input from receptor |
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265 | { |
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266 | from = singleStepBuild(tmpLine, &range); |
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267 | if (from < 0) return -34; |
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268 | } /*could be 'else'...*/ |
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269 | if (NULL != C->links[j]->from) // input from another neuron |
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270 | from = C->links[j]->from->neuro_refno; |
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271 | if (from >= 0) |
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272 | { |
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273 | sprintf(tmpLine, "c:%d,%d,%g", n_refno, from, C->links[j]->w); |
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274 | if (singleStepBuild(tmpLine, &range) < 0) return -35; |
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275 | } |
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276 | } |
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277 | } |
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278 | return 0; |
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279 | } |
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280 | |
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281 | |
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282 | void f4_Model::toF1Geno(SString &out) |
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283 | { |
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284 | cells->toF1Geno(out); |
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285 | } |
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