[286] | 1 | // This file is a part of Framsticks SDK. http://www.framsticks.com/ |
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[662] | 2 | // Copyright (C) 1999-2017 Maciej Komosinski and Szymon Ulatowski. |
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[286] | 3 | // See LICENSE.txt for details. |
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[191] | 4 | |
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| 5 | #include "geometrytestutils.h" |
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| 6 | |
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| 7 | #include "../genotypeloader.h" |
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[547] | 8 | #include "frams/genetics/preconfigured.h" |
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[382] | 9 | #include <common/virtfile/stdiofile.h> |
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[550] | 10 | #include <common/loggers/loggertostdout.h> |
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[191] | 11 | #include <math.h> |
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| 12 | #include <stdio.h> |
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| 13 | #include <stdlib.h> |
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| 14 | #include <time.h> |
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| 15 | |
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| 16 | int printGenotypesList(const char *file) |
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| 17 | { |
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| 18 | long count = 0; |
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| 19 | long totalSize = 0; |
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[732] | 20 | GenotypeMiniLoader loader(file); |
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| 21 | GenotypeMini *genotype; |
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| 22 | |
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[191] | 23 | while (genotype = loader.loadNextGenotype()) |
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| 24 | { |
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| 25 | count++; |
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| 26 | totalSize += genotype->genotype.len(); |
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[732] | 27 | |
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[191] | 28 | fprintf(stderr, "%d. (%6d chars) %s\n", count, genotype->genotype.len(), |
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[348] | 29 | genotype->name.c_str()); |
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[191] | 30 | } |
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[732] | 31 | |
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| 32 | if (loader.getStatus() == GenotypeMiniLoader::OnError) |
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[191] | 33 | { |
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[348] | 34 | fprintf(stderr, "Error: %s\n", loader.getError().c_str()); |
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[191] | 35 | return 2; |
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| 36 | } |
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| 37 | else |
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| 38 | { |
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| 39 | fprintf(stderr, "\ntotal: %d items, %d chars\n", count, totalSize); |
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| 40 | return 0; |
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| 41 | } |
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| 42 | } |
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| 43 | |
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| 44 | class TestInvoker |
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| 45 | { |
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[732] | 46 | public: |
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| 47 | virtual void operator()(Model &model) = 0; |
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[737] | 48 | virtual ~TestInvoker() {} |
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[191] | 49 | }; |
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| 50 | |
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| 51 | int executeTestUsingLoadedModel(const char *file, const char *genoId, TestInvoker &test) |
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| 52 | { |
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| 53 | const char* genoName = genoId; |
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| 54 | const int genoIndex = isdigit(genoId[0]) ? atol(genoId) : 0; |
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| 55 | long count = 0; |
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[732] | 56 | GenotypeMiniLoader loader(file); |
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| 57 | GenotypeMini *genotype; |
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| 58 | |
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[191] | 59 | while (genotype = loader.loadNextGenotype()) |
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| 60 | { |
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| 61 | count++; |
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[732] | 62 | |
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[348] | 63 | if ((genoIndex == count) || (strcmp(genotype->name.c_str(), genoName) == 0)) |
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[191] | 64 | { |
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| 65 | Model model(genotype->genotype); |
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[732] | 66 | |
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[191] | 67 | if (!model.isValid()) |
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| 68 | { |
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[662] | 69 | fprintf(stderr, "Cannot build a valid Model from this genotype!\n"); |
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[191] | 70 | return 4; |
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| 71 | } |
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[662] | 72 | SolidsShapeTypeModel sst_model(model); |
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| 73 | test(sst_model); |
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[191] | 74 | return 0; |
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| 75 | } |
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| 76 | } |
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[732] | 77 | |
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| 78 | if (loader.getStatus() == GenotypeMiniLoader::OnError) |
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[191] | 79 | { |
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[348] | 80 | fprintf(stderr, "Error: %s\n", loader.getError().c_str()); |
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[191] | 81 | return 2; |
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| 82 | } |
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| 83 | else |
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| 84 | { |
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| 85 | fprintf(stderr, "Genotype %s not found in %s\n", genoId, file); |
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| 86 | return 3; |
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| 87 | } |
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| 88 | } |
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| 89 | |
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| 90 | int executeTestUsingRandomModel(int shape, TestInvoker &test) |
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| 91 | { |
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| 92 | Model model; |
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| 93 | model.open(); |
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| 94 | |
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| 95 | if ((shape < 1) || (shape > 3)) |
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| 96 | { |
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[732] | 97 | shape = (rand() % 3) + 1; |
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[191] | 98 | } |
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| 99 | |
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| 100 | Part *part = model.addNewPart(Part::Shape(shape)); |
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| 101 | GeometryTestUtils::randomizePositionScaleAndOrient(part); |
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| 102 | |
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| 103 | model.close(); |
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| 104 | test(model); |
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| 105 | GeometryTestUtils::describePart(part, stdout); |
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[318] | 106 | return 0; |
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[191] | 107 | } |
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| 108 | |
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[732] | 109 | class ModelBasedTestInvoker : public TestInvoker |
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[191] | 110 | { |
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[732] | 111 | private: |
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| 112 | void(*test)(Model &); |
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| 113 | public: |
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| 114 | ModelBasedTestInvoker(void(*_test)(Model &)) : |
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| 115 | test(_test) |
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| 116 | {} |
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| 117 | void operator()(Model &model) |
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| 118 | { |
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| 119 | test(model); |
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| 120 | } |
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[191] | 121 | }; |
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| 122 | |
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[732] | 123 | int GeometryTestUtils::execute(const SString header, int argc, char *argv[], void(*test)(Model &)) |
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[191] | 124 | { |
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[550] | 125 | LoggerToStdout messages_to_stdout(LoggerBase::Enable); //comment this object out to mute error/warning messages |
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[299] | 126 | StdioFileSystem_autoselect stdiofilesys; |
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[550] | 127 | PreconfiguredGenetics genetics; |
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[732] | 128 | |
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[550] | 129 | srand(time(NULL)); |
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| 130 | |
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[191] | 131 | if ((argc == 3) && (strcmp("-l", argv[1]) == 0)) |
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| 132 | { |
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| 133 | return printGenotypesList(argv[2]); |
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| 134 | } |
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[732] | 135 | |
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[191] | 136 | if ((argc == 4) && (strcmp("-l", argv[1]) == 0)) |
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| 137 | { |
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| 138 | ModelBasedTestInvoker invoker(test); |
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| 139 | return executeTestUsingLoadedModel(argv[2], argv[3], invoker); |
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| 140 | } |
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[732] | 141 | |
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[191] | 142 | if ((argc == 2) && (strcmp("-c", argv[1]) == 0)) |
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| 143 | { |
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| 144 | ModelBasedTestInvoker invoker(test); |
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| 145 | return executeTestUsingRandomModel(-1, invoker); |
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| 146 | } |
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[732] | 147 | |
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[191] | 148 | if ((argc == 3) && (strcmp("-c", argv[1]) == 0) && isdigit(argv[2][0])) |
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| 149 | { |
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| 150 | int shape = atol(argv[2]); |
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| 151 | ModelBasedTestInvoker invoker(test); |
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| 152 | return executeTestUsingRandomModel(shape, invoker); |
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| 153 | } |
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[732] | 154 | |
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[191] | 155 | fprintf(stderr, |
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| 156 | "%s\n\n" |
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| 157 | "argument lists:\n" |
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| 158 | "-l FILENAME - to print list of models in file\n" |
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| 159 | "-l FILENAME GENO_ID - to load model from file and run test\n" |
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| 160 | "-c [SHAPE] - to create simple random model and run test\n\n" |
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| 161 | "FILENAME - name of file containing named f0 genotypes\n" |
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| 162 | "GENO_ID - either genotype name or index (1-based)\n" |
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| 163 | "SHAPE - 1=ellipsoid, 2=cuboid, 3=cylinder, others or none=random\n", |
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[348] | 164 | header.c_str()); |
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[191] | 165 | return 1; |
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| 166 | } |
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| 167 | |
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[732] | 168 | class ModelAndDensityBasedTestInvoker : public TestInvoker |
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[191] | 169 | { |
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[732] | 170 | private: |
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| 171 | void(*test)(Model &, const double); |
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| 172 | double density; |
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| 173 | public: |
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| 174 | ModelAndDensityBasedTestInvoker(void(*_test)(Model &, const double), double _density) : |
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| 175 | test(_test), |
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| 176 | density(_density) |
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| 177 | {} |
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| 178 | |
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| 179 | void operator()(Model &model) |
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| 180 | { |
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| 181 | test(model, density); |
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| 182 | } |
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[191] | 183 | }; |
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| 184 | |
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| 185 | int GeometryTestUtils::execute(const SString header, int argc, char *argv[], |
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[732] | 186 | void(*test)(Model &, const double)) |
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[191] | 187 | { |
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[550] | 188 | LoggerToStdout messages_to_stdout(LoggerBase::Enable); //comment this object out to mute error/warning messages |
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[299] | 189 | StdioFileSystem_autoselect stdiofilesys; |
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[550] | 190 | PreconfiguredGenetics genetics; |
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[732] | 191 | |
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[550] | 192 | srand(time(NULL)); |
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| 193 | |
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[191] | 194 | if ((argc == 3) && (strcmp("-l", argv[1]) == 0)) |
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| 195 | { |
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| 196 | return printGenotypesList(argv[2]); |
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| 197 | } |
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| 198 | |
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| 199 | if ((argc == 5) && (strcmp("-l", argv[1]) == 0) && isdigit(argv[4][0])) |
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| 200 | { |
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| 201 | double density = atol(argv[4]); |
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| 202 | ModelAndDensityBasedTestInvoker invoker(test, density); |
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| 203 | return executeTestUsingLoadedModel(argv[2], argv[3], invoker); |
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| 204 | } |
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[732] | 205 | |
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[191] | 206 | if ((argc == 3) && (strcmp("-c", argv[1]) == 0) && isdigit(argv[2][0])) |
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| 207 | { |
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| 208 | double density = atol(argv[2]); |
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| 209 | ModelAndDensityBasedTestInvoker invoker(test, density); |
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| 210 | return executeTestUsingRandomModel(-1, invoker); |
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| 211 | } |
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[732] | 212 | |
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[191] | 213 | if ((argc == 4) && (strcmp("-c", argv[1]) == 0) && isdigit(argv[2][0]) && isdigit(argv[3][0])) |
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| 214 | { |
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| 215 | double density = atol(argv[2]); |
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| 216 | int shape = atol(argv[3]); |
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| 217 | ModelAndDensityBasedTestInvoker invoker(test, density); |
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| 218 | return executeTestUsingRandomModel(shape, invoker); |
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| 219 | } |
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[732] | 220 | |
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[191] | 221 | fprintf(stderr, |
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| 222 | "%s\n\n" |
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[662] | 223 | "argument list:\n" |
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| 224 | "-l FILENAME - to print the list of models in file\n" |
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| 225 | "-l FILENAME GENO_ID DENSITY - to load the model from the file and run test\n" |
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| 226 | "-c DENSITY [SHAPE] - to create a simple random model and run test\n\n" |
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| 227 | "FILENAME - name of the file containing named f0 genotypes\n" |
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[191] | 228 | "GENO_ID - either genotype name or index (1-based)\n" |
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| 229 | "DENSITY - minimal number of samples per unit\n" |
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[299] | 230 | "SHAPE - 1=ellipsoid, 2=cuboid, 3=cylinder, others or none=random\n", |
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[348] | 231 | header.c_str()); |
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[191] | 232 | return 1; |
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| 233 | } |
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| 234 | |
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| 235 | void GeometryTestUtils::addAnchorToModel(Model &model) |
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| 236 | { |
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| 237 | Part *part = model.addNewPart(Part::SHAPE_ELLIPSOID); |
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[732] | 238 | |
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[191] | 239 | part->p = Pt3D(0); |
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| 240 | part->scale = Pt3D(0.1); |
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| 241 | part->vcolor = Pt3D(1.0, 0.0, 1.0); |
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[732] | 242 | |
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[191] | 243 | addAxesToModel(Pt3D(0.5), Orient(Orient_1), Pt3D(0.0), model); |
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| 244 | } |
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| 245 | |
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| 246 | void GeometryTestUtils::addPointToModel(const Pt3D &markerLocation, Model &model) |
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| 247 | { |
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| 248 | Part *anchor = model.getPart(0); |
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| 249 | Part *part = model.addNewPart(Part::SHAPE_ELLIPSOID); |
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[732] | 250 | |
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[191] | 251 | part->p = Pt3D(markerLocation); |
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| 252 | part->scale = Pt3D(0.05); |
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| 253 | part->vcolor = Pt3D(1.0, 1.0, 0.0); |
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[732] | 254 | |
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[544] | 255 | model.addNewJoint(anchor, part, Joint::SHAPE_FIXED); |
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[191] | 256 | } |
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| 257 | |
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| 258 | void GeometryTestUtils::addAxesToModel(const Pt3D &sizes, const Orient &axes, const Pt3D ¢er, |
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| 259 | Model &model) |
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| 260 | { |
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| 261 | Part *anchor = model.getPart(0); |
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| 262 | Part *part; |
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[732] | 263 | |
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[191] | 264 | part = model.addNewPart(Part::SHAPE_CUBOID); |
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| 265 | part->scale = Pt3D(sizes.x, 0.05, 0.05); |
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| 266 | part->setOrient(axes); |
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| 267 | part->p = center; |
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| 268 | part->vcolor = Pt3D(1.0, 0.0, 0.0); |
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[544] | 269 | model.addNewJoint(anchor, part, Joint::SHAPE_FIXED); |
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[732] | 270 | |
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[191] | 271 | part = model.addNewPart(Part::SHAPE_CUBOID); |
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| 272 | part->scale = Pt3D(0.05, sizes.y, 0.05); |
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| 273 | part->setOrient(axes); |
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| 274 | part->p = center; |
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| 275 | part->vcolor = Pt3D(0.0, 1.0, 0.0); |
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[544] | 276 | model.addNewJoint(anchor, part, Joint::SHAPE_FIXED); |
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[732] | 277 | |
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[191] | 278 | part = model.addNewPart(Part::SHAPE_CUBOID); |
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| 279 | part->scale = Pt3D(0.05, 0.05, sizes.z); |
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| 280 | part->setOrient(axes); |
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| 281 | part->p = center; |
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| 282 | part->vcolor = Pt3D(0.0, 0.0, 1.0); |
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[544] | 283 | model.addNewJoint(anchor, part, Joint::SHAPE_FIXED); |
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[191] | 284 | } |
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| 285 | |
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| 286 | void GeometryTestUtils::mergeModels(Model &target, Model &source) |
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| 287 | { |
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| 288 | Part *targetAnchor = target.getPart(0); |
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| 289 | Part *sourceAnchor = source.getPart(0); |
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[732] | 290 | |
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[191] | 291 | target.moveElementsFrom(source); |
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[732] | 292 | |
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[544] | 293 | target.addNewJoint(targetAnchor, sourceAnchor, Joint::SHAPE_FIXED); |
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[191] | 294 | } |
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| 295 | |
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| 296 | double frand(double from, double width) |
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| 297 | { |
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[732] | 298 | return from + width * ((rand() % 10000) / 10000.0); |
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[191] | 299 | } |
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| 300 | |
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| 301 | void GeometryTestUtils::randomizePositionScaleAndOrient(Part *part) |
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| 302 | { |
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| 303 | part->p = Pt3D(frand(1.5, 1.0), frand(1.5, 1.0), frand(1.5, 1.0)); |
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| 304 | part->scale = Pt3D(frand(0.1, 0.9), frand(0.1, 0.9), frand(0.1, 0.9)); |
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| 305 | part->setRot(Pt3D(frand(0.0, M_PI), frand(0.0, M_PI), frand(0.0, M_PI))); |
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| 306 | } |
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| 307 | |
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| 308 | void GeometryTestUtils::describePart(const Part *part, FILE *output) |
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| 309 | { |
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| 310 | fprintf(output, "# shape=%d\n", part->shape); |
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| 311 | fprintf(output, "# x=%f\n", part->p.x); |
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| 312 | fprintf(output, "# y=%f\n", part->p.y); |
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| 313 | fprintf(output, "# z=%f\n", part->p.z); |
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| 314 | fprintf(output, "# sx=%f\n", part->scale.x); |
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| 315 | fprintf(output, "# sy=%f\n", part->scale.y); |
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| 316 | fprintf(output, "# sz=%f\n", part->scale.z); |
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| 317 | fprintf(output, "# rx=%f\n", part->rot.x); |
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| 318 | fprintf(output, "# ry=%f\n", part->rot.y); |
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| 319 | fprintf(output, "# rz=%f\n", part->rot.z); |
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| 320 | } |
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