1 | #include <math.h> //HUGE_VAL
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2 | #include "geno_f0Fuzzy.h"
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3 | #include "neuroimpl-fuzzy.h"
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4 | #include "neuroimpl-fuzzy-f0.h"
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5 | #include "rndutil.h"
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6 | #include "model.h"
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7 |
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8 | #define FIELDSTRUCT Geno_f0Fuzzy
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9 | static ParamEntry GENO7param_tab[]= //external access to f0Fuzzy genetic parameters
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10 | {
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11 | {"Genetics: f0-fuzzy",1,8,},
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12 | {"f0Fuzzy_maxSets",0,0,"Max. sets","d 0 999",FIELD(maximumSetsNr),"Maximum number of fuzzy sets",},
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13 | {"f0Fuzzy_maxRules",0,0,"Max. rules","d 0 999",FIELD(maximumRulesNr),"Maximum number of fuzzy rules",},
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14 | {"f0Fuzzy_prob0",0,0,"Add new fuzzy set (with simple rule)","f 0 1",FIELD(probtab[F0Fuzzy_ADDSET]),"Probability of adding new fuzzy set with simple rule, which uses this set (1=proceed on all genes, 0.1=proceed on ten percent)",},
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15 | {"f0Fuzzy_prob1",0,0,"Remove fuzzy set","f 0 1",FIELD(probtab[F0Fuzzy_REMSET]),"Probability of removing fuzzy set (1=proceed on all genes, 0.1=proceed on ten percent)",},
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16 | {"f0Fuzzy_prob2",0,0,"Add new rule","f 0 1",FIELD(probtab[F0Fuzzy_ADDRULE]),"Probability of adding new rule (1=proceed on all genes, 0.1=proceed on ten percent)",},
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17 | {"f0Fuzzy_prob3",0,0,"Remove rule","f 0 1",FIELD(probtab[F0Fuzzy_REMRULE]),"Probability of removing rule (1=proceed on all genes, 0.1=proceed on ten percent)",},
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18 | {"f0Fuzzy_prob4",0,0,"Add new input/output to existing rule","f 0 1",FIELD(probtab[F0Fuzzy_MODRULE]),"Probability of adding new input or output to exisitng rule (1=proceed on all genes, 0.1=proceed on ten percent)",},
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19 | {"f0Fuzzy_prob5",0,0,"Remove input/output from existing rule","f 0 1",FIELD(probtab[F0Fuzzy_MOD2RULE]),"Probability of removing input or output from exisitng rule (1=proceed on all genes, 0.1=proceed on ten percent)",},
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20 | {0,},
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21 | };
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22 | #undef FIELDSTRUCT
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23 |
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24 | Geno_f0Fuzzy::Geno_f0Fuzzy()
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25 | {
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26 | par.setParamTab(GENO7param_tab);
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27 | par.select(this);
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28 | supported_format='0';
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29 | name="Fuzzy control system";
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30 | maximumSetsNr=50;
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31 | maximumRulesNr=100;
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32 | probtab[F0Fuzzy_ADDSET] = 0.01;
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33 | probtab[F0Fuzzy_REMSET] = 0.0112;
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34 | probtab[F0Fuzzy_ADDRULE]= 0.01;
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35 | probtab[F0Fuzzy_REMRULE]= 0.0222; //when new set is created, new rule (using this new set) is also created but when rule is removed, unused set are removed too
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36 | probtab[F0Fuzzy_MODRULE] = 0.005;
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37 | probtab[F0Fuzzy_MOD2RULE] = 0.005;
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38 | }
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39 |
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40 | char *Geno_f0Fuzzy::getSimplest()
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41 | {
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42 | return "p:\np:1\nj:0,1\nn:d=\"G\",j=0\nn:d=\"|\",j=0\nn:d=\"Fuzzy: ns=1, nr=1, fs=-1;0;0;1;, fr=0;0:0;0/\"\nn:d=\"ChSel:ch=0\"\nc:2, 0\nc:3, 2\nc:1, 3\n";
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43 | };
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44 |
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45 | int Geno_f0Fuzzy::markDuplicatedSets(const double fuzzySets1[], const int setsNr1, const double fuzzySets2[], const int setsNr2, int transTable[], const int setsNr3)
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46 | {
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47 | if(setsNr1+setsNr2!=setsNr3) return -1;
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48 | int i, j;
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49 | for(i=0;i<setsNr1;i++)
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50 | for(j=0;j<setsNr2;j++)
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51 | if((fuzzySets1[4*i]==fuzzySets2[4*j])&&(fuzzySets1[4*i+1]==fuzzySets2[4*j+1])&&
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52 | (fuzzySets1[4*i+2]==fuzzySets2[4*j+2])&&(fuzzySets1[4*i+3]==fuzzySets2[4*j+3]))
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53 | transTable[setsNr1+j]=i; //mark equal sets
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54 | return 0;
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55 | }
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56 |
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57 |
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58 | int Geno_f0Fuzzy::nearestSet(double set[4], double sets[], int setsNr)
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59 | {
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60 | int i, nearest=0;
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61 | double disCur, disNear;
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62 |
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63 | disCur=disNear=10; //the largest distance i between -1;-1;-1;-1 and 1;1;1;1, and equals 8.
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64 | for(i=0;i<setsNr;i++)
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65 | {
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66 | disCur=fabs(sets[4*i]-set[0])+fabs(sets[4*i+1]-set[1])+
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67 | fabs(sets[4*i+2]-set[2])+fabs(sets[4*i+3]-set[3]);
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68 | if(disCur<disNear){ nearest=i; disNear=disCur; }
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69 | }
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70 |
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71 | return nearest;
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72 | }
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73 |
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74 | int Geno_f0Fuzzy::changeSetsNumeration(SString &rules, int transTable[], int nrItems)
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75 | {
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76 | //for each rule (from rules string), change number of fuzzy set into new one
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77 | int pos=0;
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78 | SString oneRule, newRules;
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79 | while(rules.getNextToken(pos, oneRule, '/'))
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80 | {
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81 | SString cond, dec, nrStr;
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82 | int p=0, setNr;
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83 | char temp[10];
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84 | oneRule.getNextToken(p, cond, ':');
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85 | oneRule.getNextToken(p, dec, '/');
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86 | p=0;
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87 | while(cond.getNextToken(p, nrStr, ';')) //first: input number
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88 | {
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89 | newRules += nrStr; newRules += ";";
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90 | cond.getNextToken(p, nrStr, ';'); //then fuzzy set nr
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91 | if((setNr=atoi(nrStr))>=nrItems)
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92 | sprintf(temp, "%i", setNr); //might occur when new fuzzy set and new fuzzy rule added - does not need to be transformated
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93 | else
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94 | sprintf(temp, "%i", transTable[setNr]); //transformate set number
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95 | newRules += temp;
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96 | if(p<cond.len())
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97 | newRules += ";";
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98 | }
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99 | p=0; newRules += ":";
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100 | while(dec.getNextToken(p, nrStr, ';')) //first: output number
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101 | {
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102 | newRules += nrStr; newRules += ";";
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103 | dec.getNextToken(p, nrStr, ';'); //then fuzzy set nr
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104 | if((setNr=atoi(nrStr))>=nrItems)
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105 | sprintf(temp, "%i", setNr); //might occur when new fuzzy set and new fuzzy rule added - does not need to be transformated
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106 | else
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107 | sprintf(temp, "%i", transTable[setNr]); //transformate set number
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108 | newRules += temp;
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109 | if(p<dec.len())
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110 | newRules += ";";
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111 | }
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112 | newRules += "/";
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113 | }
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114 |
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115 | rules=newRules;
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116 | return 0;
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117 | }
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118 |
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119 | int Geno_f0Fuzzy::removeUnusedSets(SString &sets, SString rules, int &setsNr, int transTable[])
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120 | {
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121 | //for each rule (from rules string), change number of fuzzy set into new one
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122 | int pos=0, i, nrUsedSets, *transTableOryginal = new int[setsNr];
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123 | bool *setUsed = new bool[setsNr], unusedPresent;
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124 | SString oneRule, newSets, nrStr;
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125 | for(i=0;i<setsNr;i++) { setUsed[i]=false; transTableOryginal[i]=transTable[i];} //copy oryginal values of trans table
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126 |
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127 | //mark used sets
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128 | while(rules.getNextToken(pos, oneRule, '/'))
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129 | {
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130 | SString cond, dec;
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131 | int p=0, setNr;
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132 | oneRule.getNextToken(p, cond, ':');
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133 | oneRule.getNextToken(p, dec, '/');
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134 | p=0;
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135 | while(cond.getNextToken(p, nrStr, ';')) //first: input number
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136 | {
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137 | cond.getNextToken(p, nrStr, ';'); //then fuzzy set nr
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138 | setNr=atoi(nrStr);
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139 | if((setNr>=setsNr)||(setNr<0)) setNr=randomN(setsNr); //if everything ok, impossible to happen
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140 | setUsed[setNr]=true;
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141 | }
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142 | p=0;
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143 | while(dec.getNextToken(p, nrStr, ';')) //first: output number
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144 | {
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145 | dec.getNextToken(p, nrStr, ';'); //then fuzzy set nr
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146 | setNr=atoi(nrStr);
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147 | if((setNr>=setsNr)||(setNr<0)) setNr=randomN(setsNr); //if everything ok,impossible to happen
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148 | setUsed[setNr]=true;
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149 | }
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150 | }
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151 |
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152 | for(i=0, nrUsedSets=0, unusedPresent=false;i<setsNr;i++)
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153 | if(setUsed[i]==false)
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154 | {
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155 | unusedPresent=true;
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156 | //change numbers in transTable - some set will be removed, so further renumeration is needed
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157 | for(int j=0;j<setsNr;j++) if(transTableOryginal[j]>i) transTable[j]--;
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158 | }
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159 | else
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160 | nrUsedSets++;
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161 |
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162 | SAFEDELETEARRAY(transTableOryginal)
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163 |
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164 | if(!unusedPresent)
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165 | {
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166 | SAFEDELETEARRAY(setUsed)
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167 | return 0; //all sets are necessery
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168 | }
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169 |
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170 | //remove from new fuzzy sets unused sets
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171 | pos=0;
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172 | newSets="";
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173 | int semicol=0, nrOfSet=0;
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174 | SString tempSet="";
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175 | while(sets.getNextToken(pos, nrStr, ';'))
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176 | {
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177 | tempSet += nrStr; tempSet += ';';
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178 | if(++semicol==4)
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179 | {
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180 | if(setUsed[nrOfSet])
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181 | newSets += tempSet;
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182 | tempSet="";
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183 | semicol=0;
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184 | nrOfSet++;
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185 | }
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186 | }
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187 |
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188 | setsNr=nrUsedSets;
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189 | sets=newSets;
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190 |
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191 | SAFEDELETEARRAY(setUsed)
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192 |
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193 | return 1;
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194 | }
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195 |
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196 | int Geno_f0Fuzzy::removeExcessiveInOut(SString &rules, int inputsNr, int outputsNr)
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197 | {
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198 | SString newRules, oneRule;
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199 | int pos, i;
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200 | char tempChar50[50];
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201 |
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202 | pos=0;
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203 | while(rules.getNextToken(pos, oneRule, '/'))
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204 | {
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205 | SString cond, dec, nrStr, newInput, newOutput;
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206 | int p=0;
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207 | bool *usedInOut, first;
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208 |
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209 | oneRule.getNextToken(p, cond, ':');
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210 | oneRule.getNextToken(p, dec, '/');
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211 |
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212 | //create input table
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213 | usedInOut = new bool[inputsNr]; for(i=0;i<inputsNr;i++) usedInOut[i]=false;
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214 | //create new rule, which omits double inputs
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215 | p=0; newInput=""; first=true;
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216 | while(cond.getNextToken(p, nrStr, ';')) //first: input number
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217 | {
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218 | int inNr=atoi(nrStr), setNr;
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219 | cond.getNextToken(p, nrStr, ';'); //then fuzzy set nr
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220 | setNr=atoi(nrStr);
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221 | if(!usedInOut[inNr]) //not used yet
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222 | {
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223 | if(!first) newInput += ';';
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224 | first=false;
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225 | sprintf(tempChar50, "%i;%i", inNr, setNr);
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226 | newInput += tempChar50;
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227 | usedInOut[inNr]=true;
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228 | }
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229 | }
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230 | SAFEDELETEARRAY(usedInOut)
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231 |
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232 | //create output table
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233 | usedInOut = new bool[outputsNr]; for(i=0;i<outputsNr;i++) usedInOut[i]=false;
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234 | //create new rule, which omits double outputs
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235 | p=0; newOutput=""; first=true;
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236 | while(dec.getNextToken(p, nrStr, ';')) //first: output number
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237 | {
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238 | int outNr=atoi(nrStr), setNr;
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239 | dec.getNextToken(p, nrStr, ';'); //then fuzzy set nr
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240 | setNr=atoi(nrStr);
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241 | if(!usedInOut[outNr]) //not used yet
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242 | {
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243 | if(!first) newOutput += ';';
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244 | first=false;
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245 | sprintf(tempChar50, "%i;%i", outNr, setNr);
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246 | newOutput += tempChar50;
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247 | usedInOut[outNr]=true;
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248 | }
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249 | }
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250 | SAFEDELETEARRAY(usedInOut)
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251 |
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252 | newRules += newInput + ":" + newOutput + "/";
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253 | }
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254 |
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255 | rules=newRules;
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256 |
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257 | return 0;
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258 | }
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259 |
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260 | int Geno_f0Fuzzy::removeExcessiveRules(SString &rules, int setsNr, int &rulesNr)
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261 | {
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262 | int *rulDef, //for each rule, remembers number of inputs and number of outputs used (in rule)
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263 | **rulesBody, //for each rule, remembers: nr input, nr fuzzy set ... nr output, nr fuzzy set ...
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264 | i, j, k, l, nrRulesToRemove, pos, unimpTemp;
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265 | const int original_rulesNr=rulesNr;
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266 | bool *rulesToRemove = new bool[original_rulesNr];
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267 | SString newRules, oneRule;
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268 |
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269 | for(i=0;i<original_rulesNr;i++) rulesToRemove[i]=false;
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270 | //create space for rules definition: number of inputs and outputs for each rule
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271 | rulDef = new int[2*original_rulesNr];
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272 | if(FuzzyF0String::countInputsOutputs(rules, rulDef, original_rulesNr))
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273 | {
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274 | SAFEDELETEARRAY(rulDef)
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275 | SAFEDELETEARRAY(rulesToRemove)
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276 | return -1; //error while parsing rules string
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277 | }
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278 | //create space for rules
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279 | rulesBody = new int*[original_rulesNr]; //list of rules that will contain rules body
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280 | for (i=0;i<original_rulesNr;i++) rulesBody[i] = new int[2*(rulDef[2*i]+rulDef[2*i+1])]; //each rule can have different number of inputs and outputs
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281 | //get from string rules body into integer variables
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282 | if(FuzzyF0String::convertStrToRules(rules, rulDef, rulesBody, setsNr, original_rulesNr, unimpTemp))
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283 | {
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284 | SAFEDELETEARRAY(rulDef)
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285 | if(rulesBody) for(i=0;i<original_rulesNr;i++) SAFEDELETEARRAY(rulesBody[i])
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286 | SAFEDELETEARRAY(rulesBody)
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287 | SAFEDELETEARRAY(rulesToRemove)
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288 | return -2; //error while parsing rules string
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289 | }
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290 |
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291 | nrRulesToRemove=0;
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292 | for(i=0;i<original_rulesNr;i++) //for every rule...
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293 | for(j=i+1;j<original_rulesNr;j++) //...compare with further rule's...
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294 | {
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295 | int similarity=0;
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296 | if(rulDef[2*j]!=rulDef[2*i]) continue;// do not check rules with different number of inputs
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297 | for(k=0;k<rulDef[2*i];k++) //..conditional part rule i
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298 | for(l=0;l<rulDef[2*j];l++) //..conditional part rule j
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299 | if((rulesBody[i][k]==rulesBody[j][l])&&(rulesBody[i][k+1]==rulesBody[j][l+1])) //if inputs nr and fuzzy sets nr are the same
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300 | similarity++; //increase similarity number
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301 | //every input and fuzzy set number of rule j equals input and fuzzy set nr of rule i
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302 | if((similarity==rulDef[2*j])&&(similarity==rulDef[2*i]))
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303 | {
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304 | if(!rulesToRemove[j]) nrRulesToRemove++; //because might happen, that rule is mark to remove more than once
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305 | rulesToRemove[j]=true;
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306 | }
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307 | }
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308 |
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309 | if(nrRulesToRemove>=original_rulesNr) //in fact, it is impossible; but it's safe to protect
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310 | {
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311 | SAFEDELETEARRAY(rulDef)
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312 | if(rulesBody) for(i=0;i<original_rulesNr;i++) SAFEDELETEARRAY(rulesBody[i])
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313 | SAFEDELETEARRAY(rulesBody)
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314 | SAFEDELETEARRAY(rulesToRemove)
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315 | return -3; //error while comparing rules
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316 | }
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317 |
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318 | if(nrRulesToRemove>0)
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319 | {
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320 | int nrOfRule=0;
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321 | //copy rules, which are not to be removed
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322 | pos=0; newRules="";
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323 | while(rules.getNextToken(pos, oneRule, '/'))
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324 | if(!rulesToRemove[nrOfRule++]) newRules += oneRule + "/";
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325 | rulesNr -= nrRulesToRemove;
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326 | rules = newRules;
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327 | }
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328 |
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329 | SAFEDELETEARRAY(rulDef)
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330 | if(rulesBody) for(i=0;i<original_rulesNr;i++) SAFEDELETEARRAY(rulesBody[i])
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331 | SAFEDELETEARRAY(rulesBody)
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332 | SAFEDELETEARRAY(rulesToRemove)
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333 |
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334 | return 0;
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335 | };
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336 |
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337 | int Geno_f0Fuzzy::sortSet(double set[4])
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338 | {
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339 | int i,j;
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340 | double fTemp;
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341 | for(i=0;i<4;i++)
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342 | {
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343 | if(set[i]>1) set[i]=1;
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344 | if(set[i]<-1) set[i]=-1;
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345 | for(j=0;j<4;j++)
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346 | if((i>j)&&(set[i]<set[j]))
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347 | {fTemp=set[i];set[i]=set[j];set[j]=fTemp;};
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348 | }
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349 | return 0;
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350 | }
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351 |
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352 | int Geno_f0Fuzzy::computeSet(double newSet[4])
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353 | { //parameters: most probably size of support and core
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354 | double core = min(fabs(0.15+0.25*RndGen.GaussStd()), 2.0), //core can not be bigger 2
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355 | coreStart = RndGen.Uni(-1,1);
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356 |
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357 | if(0.5<rnd01)
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358 | {
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359 | newSet[0] = coreStart - min(fabs(0.15*RndGen.GaussStd()), 2.0);
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360 | newSet[1] = coreStart;
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361 | newSet[2] = newSet[1] + core;
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362 | newSet[3] = newSet[2] + min(fabs(0.15*RndGen.GaussStd()), 2.0);
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363 | }
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364 | else
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365 | {
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366 | newSet[2] = coreStart;
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367 | newSet[3] = newSet[2] + min(fabs(0.15*RndGen.GaussStd()), 2.0);
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368 | newSet[1] = newSet[2] - core;
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369 | newSet[0] = newSet[1] - min(fabs(0.15*RndGen.GaussStd()), 2.0);
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370 | }
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371 |
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372 | sortSet(newSet);
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373 |
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374 | return 0;
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375 | }
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376 |
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377 | int Geno_f0Fuzzy::mutate(char *&g, float &chg,int &method)
|
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378 | {
|
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379 | int const maxTrialNr=10; //maximum number of mutating trial, if for some reason drawed mutation can not be done
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380 | SString fuzzyGeno, finalGenotype, tok, newRulesStr, newSetsStr;
|
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381 | int newSetsNr, newRulesNr;
|
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382 | int i, pos, genoUsed, genoAdded, genoRemoved, nrTrials;
|
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383 | int *transTable;
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384 | char tempChar50[50];
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385 | bool mutated;
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386 |
|
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387 | Model model(Geno(g, '0')); //create a model from genotype
|
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388 | Neuro *fuzzy=findNeuro(&model, Neuro::getClass("Fuzzy"));
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389 | if (!fuzzy) return GENOPER_OPFAIL; //if not present, fail
|
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390 | const int inputsNr=fuzzy->getInputCount(); //get number of inputs
|
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391 | const int outputsNr=NI_FuzzyNeuro::countOuts(&model, fuzzy); //count number of outputs
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392 |
|
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393 | //get neuron four properties
|
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394 | SyntParam pi=fuzzy->classProperties();
|
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395 | model.open();
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396 | const int setsNr=pi.getIntById("ns");
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397 | const int rulesNr=pi.getIntById("nr");
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398 | const SString setsStr=pi.getStringById("fs");
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399 | const SString rulesStr=pi.getStringById("fr");
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400 |
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401 | if((inputsNr<=0)||(outputsNr<=0)||
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402 | (setsStr.len()==0)||(rulesStr.len()==0)||(setsNr<=0)||(rulesNr<=0)) return GENOPER_OPFAIL; //ERROR
|
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403 |
|
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404 | //find out the real length of genotype
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405 | fuzzyGeno = setsStr+", "+rulesStr;
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406 | genoRemoved=genoAdded=genoUsed=0; //1 geno is i.e. -0.325; but this are 7 characters! so, 1 is used, 6 are unused
|
---|
407 | for(i=0;i<fuzzyGeno.len();i++) //count genes in fuzzy genotype
|
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408 | if((fuzzyGeno[i]==';')||(fuzzyGeno[i]=='/')||(fuzzyGeno[i]==':')) genoUsed++;
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409 |
|
---|
410 | //mutation - drawing
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411 | mutated=false;
|
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412 | for(nrTrials=0;(nrTrials<maxTrialNr)&&(!mutated);nrTrials++)
|
---|
413 | {
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414 | newSetsStr=""; newRulesStr=""; newSetsNr=0; newRulesNr=0;
|
---|
415 | switch(method=roulette(probtab, F0Fuzzy_COUNT))
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416 | {
|
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417 | case F0Fuzzy_ADDSET: //add new fuzzy set
|
---|
418 | if(setsNr>=maximumSetsNr) break;
|
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419 | double newSetD[4];
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420 | computeSet(newSetD); //draw set and rank rising
|
---|
421 | if(sprintf(tempChar50, "%.4lf;%.4lf;%.4lf;%.4lf;", newSetD[0], newSetD[1], newSetD[2], newSetD[3]) != EOF) //in fact, always true
|
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422 | {
|
---|
423 | newSetsStr = setsStr + tempChar50;
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424 | //add new rule, using fresh new created fuzzy set (in premise part) - prevents removing of new fuzzy set
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---|
425 | if((sprintf(tempChar50, "%i;%i:%i;%i/", randomN(inputsNr), setsNr, randomN(outputsNr), randomN(setsNr+1)) != EOF)&& //in fact, always true; but if not, nothing wrong happens
|
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426 | (rulesNr<maximumRulesNr))
|
---|
427 | { newRulesStr = rulesStr + tempChar50; newRulesNr=rulesNr+1; genoAdded+=4; }
|
---|
428 | newSetsNr=setsNr+1; //one more fuzzy set
|
---|
429 | genoAdded+=4; //four gens added
|
---|
430 | mutated=true;
|
---|
431 | }
|
---|
432 | break;
|
---|
433 | case F0Fuzzy_REMSET:{ //remove existing fuzzy set
|
---|
434 | if(setsNr<=1) break;
|
---|
435 | int setToRemove=randomN(setsNr), foundSetsPartNr=0;
|
---|
436 | pos=0;
|
---|
437 | //copy sets before set to remove
|
---|
438 | while((foundSetsPartNr!=4*setToRemove)&&(setsStr.getNextToken(pos, tok, ';')))
|
---|
439 | { newSetsStr += tok + ";"; foundSetsPartNr++; }
|
---|
440 | double removedSet[4];
|
---|
441 | //omit four numbers - one fuzzy set - and remember parameters of removed set
|
---|
442 | for(int ii=0;(ii<4)&&(setsStr.getNextToken(pos, tok, ';'));ii++) removedSet[ii]=atoi(tok);
|
---|
443 | //copy sets after set to remove
|
---|
444 | while(setsStr.getNextToken(pos, tok, ';'))
|
---|
445 | { newSetsStr += tok + ";"; foundSetsPartNr++; }
|
---|
446 | newSetsNr=setsNr-1;
|
---|
447 | newRulesNr=rulesNr;
|
---|
448 | //find the nearest set to removed one
|
---|
449 | double *newSets = new double[4*setsNr];
|
---|
450 | if(FuzzyF0String::convertStrToSets(newSetsStr, newSets, newSetsNr)!=0)
|
---|
451 | { SAFEDELETEARRAY(newSets) break; }
|
---|
452 | transTable = new int[setsNr];
|
---|
453 | for(int ii=0;ii<setToRemove;ii++) transTable[ii] = ii;
|
---|
454 | for(int ii=setToRemove;ii<setsNr;ii++) transTable[ii] = ii-1; //transformate
|
---|
455 | transTable[setToRemove]=nearestSet(removedSet, newSets, newSetsNr); //in rules, replace removed set with found nearest
|
---|
456 | SAFEDELETEARRAY(newSets)
|
---|
457 | //transformate old fuzzy sets number into new fuzzy sets number, according to transTable table
|
---|
458 | newRulesStr=rulesStr;
|
---|
459 | changeSetsNumeration(newRulesStr, transTable, setsNr);
|
---|
460 | SAFEDELETEARRAY(transTable)
|
---|
461 | //remove inputs/outputs which are unnecessery
|
---|
462 | //remove rules which are unnecessery: conditional part must be unique
|
---|
463 | //CAUTION: rules string and number of rules might change
|
---|
464 | if((removeExcessiveInOut(newRulesStr, inputsNr, outputsNr)<0)||
|
---|
465 | (removeExcessiveRules(newRulesStr, newSetsNr, newRulesNr)<0))
|
---|
466 | break;
|
---|
467 | genoRemoved+=4;
|
---|
468 | mutated=true;
|
---|
469 | break;
|
---|
470 | }
|
---|
471 | case F0Fuzzy_ADDRULE:{ //add new fuzzy rule
|
---|
472 | if(rulesNr>=maximumRulesNr) break;
|
---|
473 | SString tempSString;
|
---|
474 | bool ruleOk=true;
|
---|
475 | int nrIns=1+randomN(inputsNr), //draw number of inputs between {1,..,inputsNr}
|
---|
476 | nrOuts=1+randomN(outputsNr); //draw number of outputs between {1,..,outputsNr}
|
---|
477 | for(i=0;((i<(nrIns+nrOuts))&&(ruleOk));i++)
|
---|
478 | if(sprintf(tempChar50, "%i;%i", (i<nrIns)?randomN(inputsNr):randomN(outputsNr), randomN(setsNr)) != EOF) //write: in/out nr ; fuzzy set nr
|
---|
479 | {
|
---|
480 | tempSString += tempChar50;
|
---|
481 | if(i+1==nrIns) //end of conditional part
|
---|
482 | tempSString += ':';
|
---|
483 | else if (i+1==nrIns+nrOuts) //end of rule
|
---|
484 | tempSString += '/';
|
---|
485 | else
|
---|
486 | tempSString += ';';
|
---|
487 | }
|
---|
488 | else
|
---|
489 | ruleOk = false; //error while transformating, do not add this rule
|
---|
490 | if(ruleOk)
|
---|
491 | {
|
---|
492 | tempSString = tempSString + rulesStr;
|
---|
493 | int temp_newRulesNr = rulesNr+1;
|
---|
494 | if((removeExcessiveInOut(tempSString, inputsNr, outputsNr)<0)||
|
---|
495 | (removeExcessiveRules(tempSString, setsNr, temp_newRulesNr)<0)||
|
---|
496 | (temp_newRulesNr != rulesNr+1)) //new added rule was removed, so there was no mutation in fact!
|
---|
497 | break;
|
---|
498 | newSetsStr = setsStr; newSetsNr = setsNr;//do not change sets
|
---|
499 | newRulesStr = tempSString; newRulesNr = temp_newRulesNr; //replace with new one
|
---|
500 | genoAdded+=2*(nrIns+outputsNr); //gens added: input, set, ... , output, set, ...
|
---|
501 | mutated=true;
|
---|
502 | }
|
---|
503 | break;
|
---|
504 | }
|
---|
505 | case F0Fuzzy_REMRULE:{ //remove existing fuzzy rule
|
---|
506 | if(rulesNr<=1) break;
|
---|
507 | int ruleToRemove=randomN(rulesNr), foundRuleNr=0;
|
---|
508 | pos=0;
|
---|
509 | //copy rules before rule to remove
|
---|
510 | while((foundRuleNr!=ruleToRemove)&&(rulesStr.getNextToken(pos, tok, '/')))
|
---|
511 | { newRulesStr += tok + "/"; foundRuleNr++; }
|
---|
512 | //omit this rule
|
---|
513 | rulesStr.getNextToken(pos, tok, '/');
|
---|
514 | for(int ii=0;ii<tok.len();ii++) if((tok[ii]==';')||(tok[ii]==':')||(tok[ii]=='/')) genoRemoved++;
|
---|
515 | //copy rules after rule to remove
|
---|
516 | while(rulesStr.getNextToken(pos, tok, '/'))
|
---|
517 | { newRulesStr += tok + "/"; foundRuleNr++; }
|
---|
518 | newRulesNr = rulesNr-1;
|
---|
519 | newSetsNr = setsNr; newSetsStr = setsStr;
|
---|
520 | // after removing of the rule, an unused fuzzy set(s) may occur
|
---|
521 | //create space for new transformation table
|
---|
522 | int *transTable = new int [newSetsNr];
|
---|
523 | for(int ii=0;ii<newSetsNr;ii++) transTable[ii]=ii; //formula 1:1 - no renumeration needed now
|
---|
524 | int oldSetNr=newSetsNr; //remember number of sets used in new genotype, but before reduction
|
---|
525 | //remove unused sets; if any set was removed, renumeration is needed
|
---|
526 | if(removeUnusedSets(newSetsStr, newRulesStr, newSetsNr, transTable))
|
---|
527 | changeSetsNumeration(newRulesStr, transTable, oldSetNr); //renumerate new sets
|
---|
528 | SAFEDELETEARRAY(transTable);
|
---|
529 | mutated=true;
|
---|
530 | break;
|
---|
531 | }
|
---|
532 | case F0Fuzzy_MODRULE:{ //modify fuzzy rule: add new input/output
|
---|
533 | int ruleToChange=randomN(rulesNr), foundRuleNr=0;
|
---|
534 | SString modRule, cond, dec, tempStr;
|
---|
535 | pos=0;
|
---|
536 | //copy rules before rule to change
|
---|
537 | while((foundRuleNr!=ruleToChange)&&(rulesStr.getNextToken(pos, tok, '/')))
|
---|
538 | { newRulesStr += tok + "/"; foundRuleNr++; }
|
---|
539 | //change this rule
|
---|
540 | rulesStr.getNextToken(pos, modRule, '/');
|
---|
541 | //copy rules after rule to remove
|
---|
542 | while(rulesStr.getNextToken(pos, tok, '/'))
|
---|
543 | { newRulesStr += tok + "/"; foundRuleNr++; }
|
---|
544 | pos=0;
|
---|
545 | modRule.getNextToken(pos, cond, ':');
|
---|
546 | modRule.getNextToken(pos, dec, '/');
|
---|
547 | if(0.5<rnd01) //add input
|
---|
548 | { if(sprintf(tempChar50, ";%i;%i", randomN(inputsNr), randomN(setsNr)) != EOF) //write: in nr ; fuzzy set nr
|
---|
549 | cond += tempChar50;
|
---|
550 | else break;
|
---|
551 | }
|
---|
552 | else //add output
|
---|
553 | { if(sprintf(tempChar50, ";%i;%i", randomN(outputsNr), randomN(setsNr)) != EOF) //write: in nr ; fuzzy set nr
|
---|
554 | dec += tempChar50;
|
---|
555 | else break;
|
---|
556 | }
|
---|
557 | tempStr = newRulesStr + cond + ":" + dec + "/";
|
---|
558 | int temp_rulesNr = rulesNr;
|
---|
559 | if((removeExcessiveInOut(tempStr, inputsNr, outputsNr)<0)||
|
---|
560 | (removeExcessiveRules(tempStr, setsNr, temp_rulesNr)<0)||
|
---|
561 | (temp_rulesNr != rulesNr)) //new added in/out caused duplicated rule, so this mutation is not ok - try other
|
---|
562 | break;
|
---|
563 | newRulesStr = tempStr;
|
---|
564 | newRulesNr = rulesNr; newSetsStr = setsStr; newSetsNr = setsNr;
|
---|
565 | genoAdded+=2;
|
---|
566 | mutated=true;
|
---|
567 | break;
|
---|
568 | }
|
---|
569 | case F0Fuzzy_MOD2RULE:{ //modify fuzzy rule: remove existing input/output
|
---|
570 | int ruleToChange=randomN(rulesNr), foundRuleNr=0;
|
---|
571 | SString modRule, cond, dec, tempStr;
|
---|
572 | pos=0;
|
---|
573 | //copy rules before rule to change
|
---|
574 | while((foundRuleNr!=ruleToChange)&&(rulesStr.getNextToken(pos, tok, '/')))
|
---|
575 | { newRulesStr += tok + "/"; foundRuleNr++; }
|
---|
576 | //change this rule
|
---|
577 | rulesStr.getNextToken(pos, modRule, '/');
|
---|
578 | //copy rules after rule to remove
|
---|
579 | while(rulesStr.getNextToken(pos, tok, '/'))
|
---|
580 | { newRulesStr += tok + "/"; foundRuleNr++; }
|
---|
581 | pos=0;
|
---|
582 | modRule.getNextToken(pos, cond, ':');
|
---|
583 | modRule.getNextToken(pos, dec, '/');
|
---|
584 | pos=0;
|
---|
585 | if(0.5<rnd01) //remove input
|
---|
586 | {
|
---|
587 | int nrIns=0;
|
---|
588 | while(cond.getNextToken(pos, tok, ';'))nrIns++;
|
---|
589 | nrIns = 1 + nrIns/2; //odd number of semicolons, so 1 + ...
|
---|
590 | if(nrIns<=1) break; //can not remove - only one input!
|
---|
591 | int nrInToRem=randomN(nrIns), insFound=0;
|
---|
592 | //copy inputs before one to remove
|
---|
593 | while((insFound<nrInToRem)&&(cond.getNextToken(pos, tok, ';')))
|
---|
594 | {
|
---|
595 | if(insFound>0) tempStr += ";"; //add semic. before input number
|
---|
596 | tempStr += tok + ";"; //input number
|
---|
597 | cond.getNextToken(pos, tok, ';');
|
---|
598 | tempStr += tok; //set number
|
---|
599 | insFound++;
|
---|
600 | }
|
---|
601 | if((!cond.getNextToken(pos, tok, ';'))||(!cond.getNextToken(pos, tok, ';'))) //ommit selected input
|
---|
602 | break; //error
|
---|
603 | //copy inputs after one to remove
|
---|
604 | while(cond.getNextToken(pos, tok, ';'))
|
---|
605 | {
|
---|
606 | tempStr += ";"; tempStr += tok + ";"; //input number
|
---|
607 | cond.getNextToken(pos, tok, ';');
|
---|
608 | tempStr += tok; //set number
|
---|
609 | }
|
---|
610 | modRule = newRulesStr + tempStr + ":" + dec + "/";
|
---|
611 | }
|
---|
612 | else //remove output
|
---|
613 | {
|
---|
614 | int nrOuts=0;
|
---|
615 | while(dec.getNextToken(pos, tok, ';'))nrOuts++;
|
---|
616 | nrOuts = 1 + nrOuts/2; //odd number of semicolons, so 1 + ...
|
---|
617 | if(nrOuts<=1) break; //can not remove - only one input!
|
---|
618 | int nrOutToRem=randomN(nrOuts), outsFound=0;
|
---|
619 | //copy outputs before one to remove
|
---|
620 | while((outsFound<nrOutToRem)&&(dec.getNextToken(pos, tok, ';')))
|
---|
621 | {
|
---|
622 | if(outsFound>0) tempStr += ";"; //add semic. before output number
|
---|
623 | tempStr += tok + ";"; //output number
|
---|
624 | dec.getNextToken(pos, tok, ';');
|
---|
625 | tempStr += tok; //set number
|
---|
626 | outsFound++;
|
---|
627 | }
|
---|
628 | if((!dec.getNextToken(pos, tok, ';'))||(!dec.getNextToken(pos, tok, ';'))) //ommit selected output
|
---|
629 | break; //error
|
---|
630 | //copy outputs after one to remove
|
---|
631 | while(dec.getNextToken(pos, tok, ';'))
|
---|
632 | {
|
---|
633 | tempStr += ";"; tempStr += tok + ";"; //output number
|
---|
634 | dec.getNextToken(pos, tok, ';');
|
---|
635 | tempStr += tok; //set number
|
---|
636 | }
|
---|
637 | modRule = newRulesStr + cond + ":" + tempStr + "/";
|
---|
638 | }
|
---|
639 | tempStr = newRulesStr + modRule;
|
---|
640 | int temp_rulesNr = rulesNr;
|
---|
641 | if((removeExcessiveInOut(tempStr, inputsNr, outputsNr)<0)||
|
---|
642 | (removeExcessiveRules(tempStr, setsNr, temp_rulesNr)<0)||
|
---|
643 | (temp_rulesNr != rulesNr)) //removed in/out caused duplicated rule, so this mutation is not ok - try other
|
---|
644 | break;
|
---|
645 | newRulesStr = tempStr;
|
---|
646 | newRulesNr = rulesNr; newSetsStr = setsStr; newSetsNr = setsNr;
|
---|
647 | genoRemoved+=2;
|
---|
648 | // after removing of an input/output from the rule, an unused fuzzy set may occur
|
---|
649 | //create space for new transformation table
|
---|
650 | int *transTable = new int [newSetsNr];
|
---|
651 | for(int ii=0;ii<newSetsNr;ii++) transTable[ii]=ii; //formula 1:1 - no renumeration needed now
|
---|
652 | int oldSetNr=newSetsNr; //remember number of sets used in new genotype, but before reduction
|
---|
653 | //remove unused sets; if any set was removed, renumeration is needed
|
---|
654 | if(removeUnusedSets(newSetsStr, newRulesStr, newSetsNr, transTable))
|
---|
655 | changeSetsNumeration(newRulesStr, transTable, oldSetNr); //renumerate new sets
|
---|
656 | SAFEDELETEARRAY(transTable);
|
---|
657 | mutated=true;
|
---|
658 | break;
|
---|
659 | }
|
---|
660 | }
|
---|
661 | }
|
---|
662 |
|
---|
663 | if(!mutated)
|
---|
664 | return GENOPER_OPFAIL;
|
---|
665 |
|
---|
666 | //update new genotype
|
---|
667 | pi.setIntById("ns", newSetsNr);
|
---|
668 | pi.setIntById("nr", newRulesNr);
|
---|
669 | pi.setStringById("fs",newSetsStr);
|
---|
670 | pi.setStringById("fr",newRulesStr);
|
---|
671 | pi.update(); //force commit changes
|
---|
672 | model.close();
|
---|
673 | //get creature whole genotype
|
---|
674 | finalGenotype=model.getF0Geno().getGene();
|
---|
675 |
|
---|
676 | //replace old genotype with new one
|
---|
677 | free(g);
|
---|
678 | g=strdup((const char*)finalGenotype);
|
---|
679 |
|
---|
680 | chg=(float)(genoAdded+genoRemoved)/(genoAdded+genoRemoved+max(genoUsed-genoRemoved, 0));
|
---|
681 |
|
---|
682 | return GENOPER_OK;
|
---|
683 | }
|
---|
684 |
|
---|
685 | int Geno_f0Fuzzy::checkOrValidate(char *&geno, bool repair)
|
---|
686 | //checks or validates genotype (depends on repair param)
|
---|
687 | { //all genotype received, but only fuzzy part is to be validated!!!
|
---|
688 | //"Fuzzy: [declarations], [sets], [rules]"
|
---|
689 | SString tok, repairedSets, repairedRules, finalGenotype;
|
---|
690 | char tempChar50[50];
|
---|
691 | int pos=0, i, j, setsFound, rulesFound;
|
---|
692 | double set[4];
|
---|
693 |
|
---|
694 | Model model(Geno(geno,'0'));
|
---|
695 | if (!(model.isValid())) { if(repair) return GENOPER_OK; else return 1; } //ERROR
|
---|
696 | Neuro *fuzzy=findNeuro(&model, Neuro::getClass("Fuzzy"));
|
---|
697 | if (!fuzzy) { if(repair) return GENOPER_OK; else return 1; } //ERROR
|
---|
698 | const int inputsDeclared=fuzzy->getInputCount();
|
---|
699 | const int outputsDeclared=NI_FuzzyNeuro::countOuts(&model,fuzzy);
|
---|
700 | if((inputsDeclared<=0)||(outputsDeclared<=0))
|
---|
701 | { if(repair) return GENOPER_OK; else return 1; } //ERROR
|
---|
702 |
|
---|
703 | //get neuron four properties
|
---|
704 | SyntParam pi=fuzzy->classProperties();
|
---|
705 | model.open();
|
---|
706 | int setsDeclared=pi.getIntById("ns");
|
---|
707 | int rulesDeclared=pi.getIntById("nr");
|
---|
708 | const SString fuzzySets=pi.getStringById("fs");
|
---|
709 | const SString fuzzyRules=pi.getStringById("fr");
|
---|
710 |
|
---|
711 | //unrepairable errors: there must be some string!
|
---|
712 | if((fuzzySets.len()==0)||(fuzzyRules.len()==0))
|
---|
713 | if(repair) return GENOPER_OK; //ERROR
|
---|
714 | else return 2; //ERROR
|
---|
715 |
|
---|
716 | if((!repair)&&((setsDeclared<=0)||(rulesDeclared<=0)))
|
---|
717 | return 2; //ERROR
|
---|
718 |
|
---|
719 | //repair if corrupted
|
---|
720 | if(setsDeclared<=0)setsDeclared=1;
|
---|
721 | if(rulesDeclared<=0)rulesDeclared=1;
|
---|
722 |
|
---|
723 | //now fuzzy sets are defined; each number is separated with semicolon.
|
---|
724 | //acceptables signs are: digits, commas, colons, semicolons.
|
---|
725 | i=j=0; setsFound=0;
|
---|
726 | while (j<fuzzySets.len())
|
---|
727 | {
|
---|
728 | SString acceptSigns; //string with acceptable signs
|
---|
729 | fuzzySets.getNextToken(j,tok,';');
|
---|
730 | if(tok.len()==0) { if(!repair) return j; else continue; }//might happen, when two semicolons stand side by side
|
---|
731 | //copy only acceptable signs
|
---|
732 | for(int ii=0;ii<tok.len();ii++)
|
---|
733 | if(strchr("0123456789.-;", tok[ii])) acceptSigns += tok[ii];
|
---|
734 | else if(!repair) return j;
|
---|
735 | set[i]=atof(acceptSigns);
|
---|
736 | if(set[i]<-1) { if(!repair) return j; else set[i] = -1; }//out of range
|
---|
737 | if(set[i]>1) { if(!repair) return j; else set[i] = 1; }//out of range
|
---|
738 | if(set[i]==HUGE_VAL) { if(!repair) return j; else set[i] = (i>0?set[i-1]:-1); }//sets must not be decreasing
|
---|
739 |
|
---|
740 | if(++i==4)
|
---|
741 | {
|
---|
742 | //check if sets are rank rising
|
---|
743 | if((set[0]>set[1])||(set[1]>set[2])||(set[2]>set[3]))
|
---|
744 | { if(!repair) return j; else sortSet(set); }
|
---|
745 | if(sprintf(tempChar50, "%.4lf;%.4lf;%.4lf;%.4lf;", set[0], set[1], set[2], set[3]) != EOF)
|
---|
746 | {i=0; setsFound++; repairedSets += tempChar50;} //copy correct value
|
---|
747 | }
|
---|
748 |
|
---|
749 | if((setsFound==setsDeclared)&&(repair))
|
---|
750 | break; //found enough sets - if there were some sets left, omit them
|
---|
751 | }
|
---|
752 | // valitadion: if there were more sets than declares, nothing happens, because pointer is now after comma (end of all sets)
|
---|
753 | // checking: error
|
---|
754 | if((setsFound!=setsDeclared)&&(!repair))
|
---|
755 | return j; //ERROR - wrong number of fuzzy sets in definition or abnormal end of the string
|
---|
756 |
|
---|
757 | //now fuzzy rules are defined; each number is separated with semicolon, conditional and decisional part is separated with colon, rules are separated with slash
|
---|
758 | //acceptables signs are: digits, semicolons, colons, slashes.
|
---|
759 | i=0; rulesFound=0; pos=0;
|
---|
760 | while (pos<fuzzyRules.len()) //to the end of string - process loop for each rule
|
---|
761 | {
|
---|
762 | SString ruleSStr, ruleCondisSStr, ruleDecisSStr, nrSStr, acceptSigns;
|
---|
763 | int posRule=0, colons, i, posTemp, inputsUsedNr, outputsUsedNr;
|
---|
764 | int *inoutUsed, posOld;
|
---|
765 | bool firstInput, firstOutput;
|
---|
766 |
|
---|
767 | posOld=pos; acceptSigns = "";
|
---|
768 | fuzzyRules.getNextToken(pos,ruleSStr,'/');
|
---|
769 | for(int ii=0;ii<pos-posOld;ii++)
|
---|
770 | if(strchr("0123456789;:/", ruleSStr[ii]))
|
---|
771 | acceptSigns += ruleSStr[ii];
|
---|
772 | else if(!repair) return j+pos; //ERROR - unacceptable sign
|
---|
773 | //cut conditional part
|
---|
774 | acceptSigns.getNextToken(posRule,ruleCondisSStr,':');
|
---|
775 | //cut decisional part
|
---|
776 | acceptSigns.getNextToken(posRule,ruleDecisSStr,'/');
|
---|
777 |
|
---|
778 | //check, how many inputs is used:
|
---|
779 | colons=posRule=0;
|
---|
780 | while(++posRule<ruleCondisSStr.len())
|
---|
781 | if(ruleCondisSStr[posRule]==';') colons++;
|
---|
782 | if(!(colons%2)) //nr of colons must be odd. this rule is corrupted
|
---|
783 | {if(!repair) return j+pos; else continue; }//check another rule
|
---|
784 |
|
---|
785 | inputsUsedNr=(colons+1)/2; //count nr of inputs
|
---|
786 | if((inputsUsedNr>inputsDeclared)&&(!repair))
|
---|
787 | return j+pos; //ERROR: too many inputs
|
---|
788 | //when repair: if inputsUsedNr > declared, do nothing, because later in loop it is checked whether
|
---|
789 | //there is no duplicate input number (the only possible way of situation where inputsUsedNr > declared)
|
---|
790 |
|
---|
791 | //check how many outputs is used:
|
---|
792 | colons=posRule=0;
|
---|
793 | while(++posRule<ruleDecisSStr.len())
|
---|
794 | if(ruleDecisSStr[posRule]==';') colons++;
|
---|
795 | if(!(colons%2)) //nr of colons must be odd. this rule is corrupted - omit one
|
---|
796 | {if(!repair) return j+pos; else continue; }//check another rule
|
---|
797 |
|
---|
798 | outputsUsedNr=(colons+1)/2; //count nr of outputs
|
---|
799 | if((outputsUsedNr>outputsDeclared)&&(!repair))
|
---|
800 | return j+pos; //ERROR: too many outputs
|
---|
801 | //when repair: if outputsUsedNr > declared, do nothing, because later in loop it is checked, wether
|
---|
802 | //there is no duplicate output number (the only possible way of situation where outputsUsedNr > declared)
|
---|
803 | inoutUsed = new int[max(inputsDeclared,outputsDeclared)];
|
---|
804 | for(i=0;i<max(inputsDeclared,outputsDeclared);i++) inoutUsed[i]=0; //0=unused, -1 = used by input, +1 used by output
|
---|
805 | firstInput=true; firstOutput=true;
|
---|
806 | //check, whether inputs/outputs or fuzzy set nr is not out of range
|
---|
807 | //and check, whether there is no duplicate input/output number
|
---|
808 | for(i=0,posTemp=0;i<inputsUsedNr+outputsUsedNr;i++)
|
---|
809 | {
|
---|
810 | int tempVal;
|
---|
811 | if(i==inputsUsedNr) posTemp=0; //because in decision string - parse string from begin
|
---|
812 | if(i<inputsUsedNr) //concern inputs
|
---|
813 | {
|
---|
814 | //check input
|
---|
815 | acceptSigns = ""; posOld=posTemp;
|
---|
816 | ruleCondisSStr.getNextToken(posTemp,nrSStr,';');
|
---|
817 | for(int ii=0;ii<nrSStr.len();ii++)
|
---|
818 | if(strchr("0123456789", nrSStr[ii]))
|
---|
819 | acceptSigns += nrSStr[ii];
|
---|
820 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} //ERROR - out of range
|
---|
821 | tempVal=atoi(acceptSigns);
|
---|
822 | if(tempVal<0)
|
---|
823 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=0;}
|
---|
824 | if(tempVal>=inputsDeclared)
|
---|
825 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=inputsDeclared-1; }
|
---|
826 | if(inoutUsed[tempVal]==-1) //input is used
|
---|
827 | {
|
---|
828 | ruleCondisSStr.getNextToken(posTemp,nrSStr,';'); //omit input and fuzzy set
|
---|
829 | if(i+1 == inputsUsedNr) repairedRules += ":"; //the end of conditional part - must be here, because of continue
|
---|
830 | if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else continue;//next for loop
|
---|
831 | }
|
---|
832 | else
|
---|
833 | inoutUsed[tempVal]=-1; //used by input
|
---|
834 | if(!firstInput) repairedRules += ";"; //before input there is semicolon, except of begin of the rule
|
---|
835 | firstInput=false;
|
---|
836 | //tempVal now has a correct value
|
---|
837 | sprintf(tempChar50, "%i;", tempVal);
|
---|
838 | //correct input number:
|
---|
839 | repairedRules += tempChar50;
|
---|
840 | //check fuzzy set nr
|
---|
841 | acceptSigns = ""; posOld=posTemp;
|
---|
842 | ruleCondisSStr.getNextToken(posTemp,nrSStr,';');
|
---|
843 | for(int ii=0;ii<nrSStr.len();ii++)
|
---|
844 | if(strchr("0123456789", nrSStr[ii]))
|
---|
845 | acceptSigns += nrSStr[ii];
|
---|
846 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;}
|
---|
847 | }
|
---|
848 | else //concern output
|
---|
849 | {
|
---|
850 | //check output
|
---|
851 | acceptSigns = ""; posOld=posTemp;
|
---|
852 | ruleDecisSStr.getNextToken(posTemp,nrSStr,';');
|
---|
853 | for(int ii=0;ii<nrSStr.len();ii++)
|
---|
854 | if(strchr("0123456789", nrSStr[ii]))
|
---|
855 | acceptSigns += nrSStr[ii];
|
---|
856 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;}
|
---|
857 | tempVal=atoi(acceptSigns);
|
---|
858 | if(tempVal<0)
|
---|
859 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=0;}
|
---|
860 | if(tempVal>=outputsDeclared)
|
---|
861 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=outputsDeclared-1; }
|
---|
862 | if(inoutUsed[tempVal]==1) //output is used
|
---|
863 | {
|
---|
864 | ruleDecisSStr.getNextToken(posTemp,nrSStr,';'); //omit output and fuzzy set
|
---|
865 | if (i+1 == inputsUsedNr+outputsUsedNr) repairedRules += "/"; //the end of decisional part - must be here, because of continue
|
---|
866 | if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else continue; //next for loop
|
---|
867 | }
|
---|
868 | else
|
---|
869 | inoutUsed[tempVal]=1; //used by output
|
---|
870 | if(!firstOutput) repairedRules += ";"; //before output there is semicolon, except of begin of the decisional part of the rule
|
---|
871 | firstOutput=false;
|
---|
872 | //tempVal now has a correct value
|
---|
873 | sprintf(tempChar50, "%i;", tempVal);
|
---|
874 | //correct output number:
|
---|
875 | repairedRules += tempChar50;
|
---|
876 | //check fuzzy set nr
|
---|
877 | acceptSigns = ""; posOld=posTemp;
|
---|
878 | ruleDecisSStr.getNextToken(posTemp,nrSStr,';');
|
---|
879 | for(int ii=0;ii<nrSStr.len();ii++)
|
---|
880 | if(strchr("0123456789", nrSStr[ii]))
|
---|
881 | acceptSigns += nrSStr[ii];
|
---|
882 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;}
|
---|
883 | }
|
---|
884 | tempVal=atoi(acceptSigns);
|
---|
885 | if(tempVal<0)
|
---|
886 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=0;}
|
---|
887 | if(tempVal>=setsFound)
|
---|
888 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=setsFound-1; }
|
---|
889 | //tempVal now has a correct value
|
---|
890 | sprintf(tempChar50, "%i", tempVal);
|
---|
891 | //correct set number:
|
---|
892 | repairedRules += tempChar50;
|
---|
893 | if(i+1 == inputsUsedNr) repairedRules += ":"; //the end of conditional part
|
---|
894 | else if (i+1 == inputsUsedNr+outputsUsedNr) repairedRules += "/"; //the end of decisional part
|
---|
895 | }
|
---|
896 | SAFEDELETEARRAY(inoutUsed)
|
---|
897 | rulesFound++;
|
---|
898 | if ((rulesFound>=rulesDeclared)&&(repair))
|
---|
899 | break; //if there was more rules - omit them by not parsing any more
|
---|
900 | if ((rulesFound>rulesDeclared)&&(!repair))
|
---|
901 | return j+pos; // ERROR - too many rules - stop parsing
|
---|
902 | }
|
---|
903 |
|
---|
904 | if ((rulesFound!=rulesDeclared)&&(!repair))
|
---|
905 | return j+pos; // ERROR - wrong number of rules (too few)
|
---|
906 |
|
---|
907 | if(rulesFound<1) //could happen, when there is one rule and it is unrepairable
|
---|
908 | {
|
---|
909 | if(sprintf(tempChar50, "%i;%i:%i;%i/", randomN(inputsDeclared), randomN(setsFound), randomN(outputsDeclared), randomN(setsFound)) != EOF)
|
---|
910 | repairedRules += tempChar50; //add simple random rule
|
---|
911 | else //on error - add zeros
|
---|
912 | repairedRules += "0;0:0;0/"; //add the simplies rule, but almost impossible to happen
|
---|
913 | rulesFound=1;
|
---|
914 | }
|
---|
915 |
|
---|
916 | //when changing sets numerations, rules might change and equals
|
---|
917 | if((repair)&&(removeExcessiveRules(repairedRules, setsFound, rulesFound)<0))
|
---|
918 | return GENOPER_OPFAIL; //ERROR
|
---|
919 |
|
---|
920 | //update new genotype
|
---|
921 | pi.setIntById("ns", setsFound);
|
---|
922 | pi.setIntById("nr", rulesFound);
|
---|
923 | pi.setStringById("fs",repairedSets);
|
---|
924 | pi.setStringById("fr",repairedRules);
|
---|
925 | pi.update(); //force commit changes
|
---|
926 | model.close();
|
---|
927 | //get creature whole genotype
|
---|
928 | finalGenotype=model.getF0Geno().getGene();
|
---|
929 |
|
---|
930 | //replace old genotype with new one
|
---|
931 | free(geno);
|
---|
932 | geno=strdup((const char*)finalGenotype);
|
---|
933 |
|
---|
934 | return GENOPER_OK;
|
---|
935 | };
|
---|
936 |
|
---|
937 | int Geno_f0Fuzzy::checkValidity(const char *geno)
|
---|
938 | {
|
---|
939 | char *genoCopy=strdup(geno);
|
---|
940 | int res=checkOrValidate(genoCopy, false); //false = on errors do not repair but return error position
|
---|
941 | free(genoCopy);
|
---|
942 | return res;
|
---|
943 | };
|
---|
944 |
|
---|
945 | int Geno_f0Fuzzy::validate(char *&geno)
|
---|
946 | {
|
---|
947 | checkOrValidate(geno, true); //true = on errors try to repair but might be unrepairable
|
---|
948 | return GENOPER_OK;
|
---|
949 | };
|
---|
950 |
|
---|
951 | int Geno_f0Fuzzy::crossOver(char *&g1, char *&g2, float &chg1,float &chg2)
|
---|
952 | { //both bodies should be the same; the only difference should be in fuzzy neuron
|
---|
953 |
|
---|
954 | SString finalGenotype, tok1, tok2;
|
---|
955 | SString fuzzyGeno1, fuzzyGeno2, newSet, sets3, rules3;
|
---|
956 | int setsNr3, rulesNr3;
|
---|
957 | int i, j, k, unimpTemp;
|
---|
958 | int *transTable, *parentsIn, *parentsOut, *parentRules, *rulDef1, *rulDef2, *rulDef3, **rulesBody1, **rulesBody2;
|
---|
959 | int genoUsed1, genoUsed2, copied1, copied2, rulesTaken1, rulesTaken2, rulesUsed3, selectedRule1, selectedRule2;
|
---|
960 | int inputsUsed, outputsUsed;
|
---|
961 | char tempChar50[50];
|
---|
962 | double *fuzzySets1, *fuzzySets2, *fuzzySets3;
|
---|
963 |
|
---|
964 | Model model1(Geno(g1,'0'));
|
---|
965 | Model model2(Geno(g2,'0'));
|
---|
966 | Neuro *fuzzy1=findNeuro(&model1, Neuro::getClass("Fuzzy"));
|
---|
967 | Neuro *fuzzy2=findNeuro(&model2, Neuro::getClass("Fuzzy"));
|
---|
968 | if (!fuzzy1 || !fuzzy2) return GENOPER_OPFAIL; //ERROR
|
---|
969 | const int inputsNr1=fuzzy1->getInputCount();
|
---|
970 | const int inputsNr2=fuzzy2->getInputCount();
|
---|
971 | const int outputsNr1=NI_FuzzyNeuro::countOuts(&model1,fuzzy1);
|
---|
972 | const int outputsNr2=NI_FuzzyNeuro::countOuts(&model2,fuzzy2);
|
---|
973 | if((inputsNr1<=0)||(outputsNr1<=0)||(inputsNr2<=0)||(outputsNr2<=0)||
|
---|
974 | (inputsNr1!=inputsNr2)||(outputsNr1!=outputsNr2)) return GENOPER_OPFAIL; //ERROR
|
---|
975 |
|
---|
976 | //get neurons four properties
|
---|
977 | SyntParam pi1=fuzzy1->classProperties();
|
---|
978 | SyntParam pi2=fuzzy2->classProperties();
|
---|
979 | model1.open();
|
---|
980 | model2.open();
|
---|
981 | const int setsNr1=pi1.getIntById("ns");
|
---|
982 | const int setsNr2=pi2.getIntById("ns");
|
---|
983 | const int rulesNr1=pi1.getIntById("nr");
|
---|
984 | const int rulesNr2=pi2.getIntById("nr");
|
---|
985 | const SString sets1=pi1.getStringById("fs");
|
---|
986 | const SString sets2=pi2.getStringById("fs");
|
---|
987 | const SString rules1=pi1.getStringById("fr");
|
---|
988 | const SString rules2=pi2.getStringById("fr");
|
---|
989 |
|
---|
990 | if((sets1.len()==0)||(rules1.len()==0)||(sets2.len()==0)||(rules2.len()==0)||
|
---|
991 | (setsNr1<=0)||(rulesNr1<=0)||(setsNr2<=0)||(rulesNr2<=0))
|
---|
992 | return GENOPER_OPFAIL; //ERROR
|
---|
993 |
|
---|
994 | //find out the real length of genotype - count number of semicolons
|
---|
995 | genoUsed1 = 0; //1 geno is i.e. -0.325; but this are 7 characters! so, 1 is used, 6 are unused
|
---|
996 | fuzzyGeno1 = sets1+", "+rules1;
|
---|
997 | for(i=0;i<fuzzyGeno1.len();i++)
|
---|
998 | if((fuzzyGeno1[i]==';')||(fuzzyGeno1[i]=='/')||(fuzzyGeno1[i]==':')) genoUsed1++;
|
---|
999 | genoUsed2 = 0; //1 geno is i.e. -0.325; but this are 7 characters! so, 1 is used, 6 are unused
|
---|
1000 | fuzzyGeno2 = sets2+", "+rules2;
|
---|
1001 | for(i=0;i<fuzzyGeno2.len();i++)
|
---|
1002 | if((fuzzyGeno2[i]==';')||(fuzzyGeno2[i]=='/')||(fuzzyGeno2[i]==':')) genoUsed2++;
|
---|
1003 |
|
---|
1004 |
|
---|
1005 | // -------------------------------------
|
---|
1006 | // ------- cross over sets part --------
|
---|
1007 | // -------------------------------------
|
---|
1008 |
|
---|
1009 | copied1=copied2=0; //how many gens (in whole rules and whole sets) were copied (without changeing!) from parent 1 / 2 ?
|
---|
1010 |
|
---|
1011 | fuzzySets1 = new double[4*setsNr1]; fuzzySets2 = new double[4*setsNr2];
|
---|
1012 | FuzzyF0String::convertStrToSets(sets1, fuzzySets1, setsNr1);
|
---|
1013 | FuzzyF0String::convertStrToSets(sets2, fuzzySets2, setsNr2);
|
---|
1014 |
|
---|
1015 | //in fact, there is no crossing over of sets, but copy all parents' sets
|
---|
1016 | //with marking duplicated sets
|
---|
1017 | setsNr3 = setsNr1+setsNr2;
|
---|
1018 | transTable = new int[setsNr3];
|
---|
1019 | for(i=0;i<setsNr1+setsNr2;i++) transTable[i]=-2; //all sets are taken to descendant
|
---|
1020 | if(markDuplicatedSets(fuzzySets1, setsNr1, fuzzySets2, setsNr2, transTable, setsNr3)!=0)
|
---|
1021 | {
|
---|
1022 | SAFEDELETEARRAY(fuzzySets1) SAFEDELETEARRAY(fuzzySets2) SAFEDELETEARRAY(transTable)
|
---|
1023 | return GENOPER_OPFAIL; //ERROR
|
---|
1024 | }
|
---|
1025 |
|
---|
1026 | fuzzySets3 = new double[4*setsNr3];
|
---|
1027 | j=0; sets3 = "";
|
---|
1028 | //copy sets from parent 1 and 2
|
---|
1029 | for(i=0;(i<setsNr1+setsNr2)&&(j<setsNr3);i++)
|
---|
1030 | if(transTable[i]==-2) //this set is marked to be taken
|
---|
1031 | {
|
---|
1032 | if(i<setsNr1)
|
---|
1033 | {
|
---|
1034 | fuzzySets3[4*j]=fuzzySets1[4*i]; fuzzySets3[4*j+1]=fuzzySets1[4*i+1];
|
---|
1035 | fuzzySets3[4*j+2]=fuzzySets1[4*i+2]; fuzzySets3[4*j+3]=fuzzySets1[4*i+3];
|
---|
1036 | }
|
---|
1037 | else
|
---|
1038 | {
|
---|
1039 | fuzzySets3[4*j]=fuzzySets2[4*(i-setsNr1)]; fuzzySets3[4*j+1]=fuzzySets2[4*(i-setsNr1)+1];
|
---|
1040 | fuzzySets3[4*j+2]=fuzzySets2[4*(i-setsNr1)+2]; fuzzySets3[4*j+3]=fuzzySets2[4*(i-setsNr1)+3];
|
---|
1041 | };
|
---|
1042 | if(sprintf(tempChar50, "%.4lf;%.4lf;%.4lf;%.4lf;", fuzzySets3[4*j], fuzzySets3[4*j+1], fuzzySets3[4*j+2], fuzzySets3[4*j+3]) != EOF)
|
---|
1043 | {
|
---|
1044 | transTable[i] = j++; //remember, from which set it was copy: [4]=2 means that fuzzy set [4] from parent 1 was copy into descendant fuzzy set [2]. when i>setsNr1, substract setsNr1 from value to obtain number of fuzzy set from parent 2
|
---|
1045 | sets3 += tempChar50;
|
---|
1046 | }
|
---|
1047 | else
|
---|
1048 | {
|
---|
1049 | SAFEDELETEARRAY(fuzzySets1)
|
---|
1050 | SAFEDELETEARRAY(fuzzySets2)
|
---|
1051 | SAFEDELETEARRAY(fuzzySets3)
|
---|
1052 | SAFEDELETEARRAY(transTable)
|
---|
1053 | return GENOPER_OPFAIL; //ERROR
|
---|
1054 | }
|
---|
1055 | }
|
---|
1056 |
|
---|
1057 | // -------------------------------------
|
---|
1058 | // ------- cross over rules part -------
|
---|
1059 | // -------------------------------------
|
---|
1060 |
|
---|
1061 | rules3="";
|
---|
1062 | //draw number of fuzzy rules for the descendant
|
---|
1063 | rulesNr3 = min(rulesNr1,rulesNr2) + randomN(abs(rulesNr1-rulesNr2)+1);
|
---|
1064 |
|
---|
1065 | rulDef1 = new int[2*rulesNr1]; //for each rule, remembers number of inputs and number of outputs used (in rule)
|
---|
1066 | rulDef2 = new int[2*rulesNr2];
|
---|
1067 | rulDef3 = new int[2*rulesNr3]; //it will be filled later, with random values
|
---|
1068 |
|
---|
1069 | FuzzyF0String::countInputsOutputs(rules1, rulDef1, rulesNr1);
|
---|
1070 | FuzzyF0String::countInputsOutputs(rules2, rulDef2, rulesNr2);
|
---|
1071 | for(i=0;i<2*rulesNr3;i++) rulDef3[i]=-1; //unknown number of inputs/outputs
|
---|
1072 |
|
---|
1073 | //create space for rules from parent 1 and 2
|
---|
1074 | rulesBody1 = new int*[rulesNr1]; //list of rules that will contain rules body
|
---|
1075 | for (i=0;i<rulesNr1;i++) rulesBody1[i] = new int[2*(rulDef1[2*i]+rulDef1[2*i+1])]; //each rule can have different number of inputs and outputs
|
---|
1076 | rulesBody2 = new int*[rulesNr2]; //list of rules that will contain rules body
|
---|
1077 | for (i=0;i<rulesNr2;i++) rulesBody2[i] = new int[2*(rulDef2[2*i]+rulDef2[2*i+1])]; //each rule can have different number of inputs and outputs
|
---|
1078 |
|
---|
1079 | FuzzyF0String::convertStrToRules(rules1, rulDef1, rulesBody1, setsNr1, rulesNr1, unimpTemp);
|
---|
1080 | FuzzyF0String::convertStrToRules(rules2, rulDef2, rulesBody2, setsNr2, rulesNr2, unimpTemp);
|
---|
1081 |
|
---|
1082 | //draw rules from both parents
|
---|
1083 | parentRules = new int[rulesNr1+rulesNr2];
|
---|
1084 | for(i=0;i<rulesNr1+rulesNr2;i++) parentRules[i]=-1; //any rule is taken yet
|
---|
1085 |
|
---|
1086 | rulesTaken1=rulesTaken2=rulesUsed3=0;
|
---|
1087 | while(rulesUsed3<rulesNr3)
|
---|
1088 | {
|
---|
1089 | //draw rule from parent 1
|
---|
1090 | selectedRule1=-1;
|
---|
1091 | if(rulesTaken1<rulesNr1) //if there are some rules left in parent 1
|
---|
1092 | {
|
---|
1093 | //select random rule from parent 1
|
---|
1094 | k=randomN(rulesNr1);
|
---|
1095 | if(parentRules[k]==-1) selectedRule1=k;
|
---|
1096 | else //if rule is taken, search the nearest free
|
---|
1097 | for(j=0;j<rulesNr1;j++)
|
---|
1098 | if(parentRules[(k+j)%rulesNr1]==-1) { selectedRule1=(k+j)%rulesNr1; j=rulesNr1; }
|
---|
1099 | else if(parentRules[abs((k-j)%rulesNr1)]==-1) { selectedRule1=abs((k-j)%rulesNr1); j=rulesNr1; }
|
---|
1100 | }
|
---|
1101 | if (selectedRule1==-1) //all rules are taken from parent 1
|
---|
1102 | break;
|
---|
1103 |
|
---|
1104 | //draw rule from parent 2
|
---|
1105 | selectedRule2=-1;
|
---|
1106 | if(rulesTaken2<rulesNr2) //if there are some rules left in parent 2
|
---|
1107 | {
|
---|
1108 | //select random rule from parent 2
|
---|
1109 | k=randomN(rulesNr2);
|
---|
1110 | if(parentRules[rulesNr1+k]==-1) { parentRules[rulesNr1+k]=-2; selectedRule2=k; } //mark as 'taken'
|
---|
1111 | else //if rule is taken, search the nearest free
|
---|
1112 | for(j=0;j<rulesNr2;j++)
|
---|
1113 | if(parentRules[rulesNr1+(k+j)%rulesNr2]==-1) {selectedRule2=(k+j)%rulesNr2; j=rulesNr2; }
|
---|
1114 | else if(parentRules[rulesNr1+abs((k-j)%rulesNr2)]==-1) { selectedRule2=abs((k-j)%rulesNr2); j=rulesNr2; }
|
---|
1115 | }
|
---|
1116 |
|
---|
1117 | if (selectedRule2==-1) //all rules are taken from parent 1
|
---|
1118 | break;
|
---|
1119 |
|
---|
1120 | parentRules[selectedRule1]=-2; //mark as 'taken'
|
---|
1121 | parentRules[rulesNr1+selectedRule2]=-2;
|
---|
1122 |
|
---|
1123 | //draw number of inputs and outputs in new rule, (created by crossing over of 2 parents)
|
---|
1124 | rulDef3[2*rulesUsed3] = min(rulDef1[2*selectedRule1], rulDef2[2*selectedRule2]) + randomN(abs(rulDef1[2*selectedRule1]-rulDef2[2*selectedRule2])+1); //random number of inputs
|
---|
1125 | rulDef3[2*rulesUsed3+1] = min(rulDef1[2*selectedRule1+1], rulDef2[2*selectedRule2+1]) + randomN(abs(rulDef1[2*selectedRule1+1]-rulDef2[2*selectedRule2+1])+1); //random number of outputs
|
---|
1126 |
|
---|
1127 | int nrInputsP1 = rulDef1[2*selectedRule1], nrInputsP2 = rulDef2[2*selectedRule2], //some variables' names
|
---|
1128 | nrOutputsP1 = rulDef1[2*selectedRule1+1], nrOutputsP2 = rulDef2[2*selectedRule2+1], //become now more understandable
|
---|
1129 | nrInputsP3 = rulDef3[2*rulesUsed3], nrOutputsP3 = rulDef3[2*rulesUsed3+1];
|
---|
1130 |
|
---|
1131 | //prepare drawing inputs from parent 1 and 2
|
---|
1132 | int sumParentsInputs = nrInputsP1+nrInputsP2;
|
---|
1133 | parentsIn = new int[sumParentsInputs]; //size: parent's 1 and 2 number of inputs
|
---|
1134 |
|
---|
1135 | for(i=0;i<sumParentsInputs;i++) parentsIn[i]=-1; //not taken yet
|
---|
1136 | //search for duplicated output and mark one of them outputs as 'taken'
|
---|
1137 | for(i=0;i<nrInputsP1;i++)
|
---|
1138 | for(j=0;j<nrInputsP2;j++)
|
---|
1139 | if(rulesBody1[selectedRule1][2*i]==rulesBody2[selectedRule2][2*j]) //if inputs numbers are the same,
|
---|
1140 | {
|
---|
1141 | bool takenP1=rnd01<0.5; //draw, which input should be mark as taken
|
---|
1142 | if (takenP1) parentsIn[i]=-2;
|
---|
1143 | else parentsIn[j+nrInputsP1]=-2;
|
---|
1144 | }
|
---|
1145 |
|
---|
1146 | //now drawig is well prepared
|
---|
1147 | inputsUsed=0;
|
---|
1148 | while(inputsUsed<nrInputsP3) //loop as long, as inputs taken (from p1&p2) < length of descendant's input part
|
---|
1149 | {
|
---|
1150 | //draw input (which was not used yet) from both parents
|
---|
1151 | do k=randomN(sumParentsInputs);
|
---|
1152 | while (parentsIn[k]!=-1); //draw as long, as input is not taken yet
|
---|
1153 | if(k<nrInputsP1) //concerns input from parent 1
|
---|
1154 | sprintf(tempChar50, "%i;%i", rulesBody1[selectedRule1][2*k], transTable[rulesBody1[selectedRule1][2*k+1]]); //get input and transformated fuzzy set nr
|
---|
1155 | else //concerns input from parent 2
|
---|
1156 | sprintf(tempChar50, "%i;%i", rulesBody2[selectedRule2][2*(k-nrInputsP1)], transTable[setsNr1+rulesBody2[selectedRule2][2*(k-nrInputsP1)+1]]); //get input and transformated fuzzy set nr. setsNr1+ because transTable is sum of setsNr1+setsNr2
|
---|
1157 | rules3 += tempChar50;
|
---|
1158 | if (inputsUsed+1<nrInputsP3) rules3 += ";";
|
---|
1159 | inputsUsed++; parentsIn[k]=-2; //mark as taken
|
---|
1160 | }
|
---|
1161 | rules3 += ":";
|
---|
1162 |
|
---|
1163 | SAFEDELETEARRAY(parentsIn)
|
---|
1164 |
|
---|
1165 | //prepare drawing outputs from parent 1 and 2
|
---|
1166 | int sumParentsOutputs = nrOutputsP1+nrOutputsP2;
|
---|
1167 | parentsOut = new int[sumParentsOutputs]; //size: parent's 1 and 2 number of inputs
|
---|
1168 |
|
---|
1169 | for(i=0;i<sumParentsOutputs;i++) parentsOut[i]=-1; //not taken yet
|
---|
1170 | //search duplicated output and mark one of them outputs as 'taken'
|
---|
1171 | for(i=0;i<nrOutputsP1;i++)
|
---|
1172 | for(j=0;j<nrOutputsP2;j++)
|
---|
1173 | if(rulesBody1[selectedRule1][2*(i+nrInputsP1)]==rulesBody2[selectedRule2][2*(j+nrInputsP2)]) //if outputs numbers are the same,
|
---|
1174 | {
|
---|
1175 | bool takenP1=rnd01<0.5; //draw, which input should be mark as taken
|
---|
1176 | if (takenP1) parentsOut[i]=-2;
|
---|
1177 | else parentsOut[j+nrOutputsP1]=-2;
|
---|
1178 | }
|
---|
1179 |
|
---|
1180 | //now drawig is well prepared
|
---|
1181 | outputsUsed=0;
|
---|
1182 | while(outputsUsed<nrOutputsP3) //loop as long, as outputs taken (from p1&p2) < length of descendant's output part
|
---|
1183 | {
|
---|
1184 | //draw output (which was not used yet) from both parents
|
---|
1185 | do k=randomN(sumParentsOutputs);
|
---|
1186 | while (parentsOut[k]!=-1); //draw as long, as output is not taken yet
|
---|
1187 | if(k<nrOutputsP1) //concerns output from parent 1
|
---|
1188 | sprintf(tempChar50, "%i;%i", rulesBody1[selectedRule1][2*(k+nrInputsP1)], transTable[rulesBody1[selectedRule1][2*(k+nrInputsP1)+1]]); //get output and transformated fuzzy set nr
|
---|
1189 | else //concerns output from parent 2
|
---|
1190 | sprintf(tempChar50, "%i;%i", rulesBody2[selectedRule2][2*(k-nrOutputsP1+nrInputsP2)], transTable[setsNr1+rulesBody2[selectedRule2][2*(k-nrOutputsP1+nrInputsP2)+1]]); //get output and transformated fuzzy set nr
|
---|
1191 | rules3 += tempChar50;
|
---|
1192 | if (outputsUsed+1<nrOutputsP3) rules3 += ";";
|
---|
1193 | outputsUsed++; parentsOut[k]=-2; //mark as taken
|
---|
1194 | }
|
---|
1195 | rules3 += "/";
|
---|
1196 |
|
---|
1197 | SAFEDELETEARRAY(parentsOut)
|
---|
1198 |
|
---|
1199 | rulesUsed3++; rulesTaken1++; rulesTaken2++;
|
---|
1200 | }
|
---|
1201 |
|
---|
1202 | //if there is no more rules pairs, and descendant needs more rules, copy rules from 'bigger' parent
|
---|
1203 | if(rulesTaken1<rulesNr1)
|
---|
1204 | {
|
---|
1205 | for(j=0;(j<rulesNr1)&&(rulesUsed3<rulesNr3);j++)
|
---|
1206 | if(parentRules[j]==-1) //search for not taken rule
|
---|
1207 | {
|
---|
1208 | parentRules[j]=-2; //taken
|
---|
1209 | rulDef3[2*rulesUsed3] = rulDef1[2*j]; rulDef3[2*rulesUsed3+1] = rulDef1[2*j+1]; //copy whole rule - do not change number of inputs and outputs
|
---|
1210 | for(k=0;k<rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1];k++) //copy conditional and decisional part
|
---|
1211 | {
|
---|
1212 | sprintf(tempChar50, "%i;%i", rulesBody1[j][2*k], transTable[rulesBody1[j][2*k+1]]);
|
---|
1213 | rules3 += tempChar50;
|
---|
1214 | if(k+1==rulDef3[2*rulesUsed3]) //if end of inputs, put colon
|
---|
1215 | rules3 += ":";
|
---|
1216 | else if(k+1==rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1]) //if end of outputs, put slash
|
---|
1217 | rules3 += "/";
|
---|
1218 | else
|
---|
1219 | rules3 += ";";
|
---|
1220 | }
|
---|
1221 | rulesUsed3++; rulesTaken1++;
|
---|
1222 | copied1+=2*k; //all inputs, fuzzy sets, ..., all outputs, fuzzy sets
|
---|
1223 | }
|
---|
1224 | }
|
---|
1225 | if(rulesTaken2<rulesNr2)
|
---|
1226 | for(j=0;(j<rulesNr2)&&(rulesUsed3<rulesNr3);j++)
|
---|
1227 | if(parentRules[rulesNr1+j]==-1) //search for not taken rule
|
---|
1228 | {
|
---|
1229 | selectedRule2=j; parentRules[rulesNr1+j]=-2; //taken
|
---|
1230 | rulDef3[2*rulesUsed3] = rulDef2[2*j]; rulDef3[2*rulesUsed3+1] = rulDef2[2*j+1]; //copy whole rule - do not change number of inputs and outputs
|
---|
1231 | for(k=0;k<rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1];k++) //copy conditional and decisional part
|
---|
1232 | {
|
---|
1233 | sprintf(tempChar50, "%i;%i", rulesBody2[j][2*k], transTable[setsNr1+rulesBody2[j][2*k+1]]);
|
---|
1234 | rules3 += tempChar50;
|
---|
1235 | if(k+1==rulDef3[2*rulesUsed3]) //if end of inputs, put colon
|
---|
1236 | rules3 += ":";
|
---|
1237 | else if(k+1==rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1]) //if end of outputs, put slash
|
---|
1238 | rules3 += "/";
|
---|
1239 | else
|
---|
1240 | rules3 += ";";
|
---|
1241 | }
|
---|
1242 | rulesUsed3++; rulesTaken2++;
|
---|
1243 | copied2+=2*k; //all outputs, fuzzy sets, ..., all outputs, fuzzy sets
|
---|
1244 | }
|
---|
1245 |
|
---|
1246 | //no need to normalize before removing unused sets, because correct (new) number of fuzzy set already written in rules string
|
---|
1247 |
|
---|
1248 | //delete 'old' transTable
|
---|
1249 | SAFEDELETEARRAY(transTable)
|
---|
1250 |
|
---|
1251 | //create space for new transformation table
|
---|
1252 | transTable=new int [setsNr3];
|
---|
1253 | for(int ii=0;ii<setsNr3;ii++) transTable[ii]=ii; //formula 1:1 - no renumeration needed now
|
---|
1254 |
|
---|
1255 | int oldSetNr=setsNr3; //remember number of sets used in new genotype, but before reduction
|
---|
1256 | //remove unused sets; if any set was removed, renumeration is needed
|
---|
1257 | if(removeUnusedSets(sets3, rules3, setsNr3, transTable))
|
---|
1258 | changeSetsNumeration(rules3, transTable, oldSetNr); //renumerate new sets
|
---|
1259 | //after renumeration, excessive rule or input/output may occur
|
---|
1260 | if((removeExcessiveInOut(rules3, inputsNr1, outputsNr1)<0)||
|
---|
1261 | (removeExcessiveRules(rules3, setsNr3, rulesNr3)<0))
|
---|
1262 | { //should not occur
|
---|
1263 | SAFEDELETEARRAY(rulDef1) SAFEDELETEARRAY(rulDef2) SAFEDELETEARRAY(rulDef3)
|
---|
1264 | SAFEDELETEARRAY(transTable) SAFEDELETEARRAY(parentRules) SAFEDELETEARRAY(parentsIn) SAFEDELETEARRAY(parentsOut)
|
---|
1265 | SAFEDELETEARRAY(fuzzySets1) SAFEDELETEARRAY(fuzzySets2) SAFEDELETEARRAY(fuzzySets3)
|
---|
1266 | if(rulesBody1) for(i=0;i<rulesNr1;i++) SAFEDELETEARRAY(rulesBody1[i])
|
---|
1267 | if(rulesBody2) for(i=0;i<rulesNr2;i++) SAFEDELETEARRAY(rulesBody2[i])
|
---|
1268 | SAFEDELETEARRAY(rulesBody1) SAFEDELETEARRAY(rulesBody2)
|
---|
1269 | return GENOPER_OPFAIL; //did not successed
|
---|
1270 | }
|
---|
1271 | //--------------------- end of crossing over --------------------------------
|
---|
1272 |
|
---|
1273 | if( (sets3.len()==0)||(rules3.len()==0) ) //shold not occur, but for safety:
|
---|
1274 | {sets3="-1;0;0;1;"; rules3="0;0:0;0/"; setsNr3=1; rulesNr3=1; }
|
---|
1275 |
|
---|
1276 | //update new genotype
|
---|
1277 | pi1.setIntById("ns", setsNr3);
|
---|
1278 | pi1.setIntById("nr", rulesNr3);
|
---|
1279 | pi1.setStringById("fs",sets3);
|
---|
1280 | pi1.setStringById("fr",rules3);
|
---|
1281 | pi1.update(); //force commit changes
|
---|
1282 | model1.close();
|
---|
1283 | //get creature whole genotype
|
---|
1284 | finalGenotype=model1.getF0Geno().getGene();
|
---|
1285 |
|
---|
1286 | //replace old genotype with new one
|
---|
1287 | free(g1);
|
---|
1288 | g1=strdup((const char*)finalGenotype);
|
---|
1289 |
|
---|
1290 | chg1=1-(float)copied1/genoUsed1;
|
---|
1291 | chg2=1-(float)copied2/genoUsed2;
|
---|
1292 |
|
---|
1293 | SAFEDELETEARRAY(rulDef1)
|
---|
1294 | SAFEDELETEARRAY(rulDef2)
|
---|
1295 | SAFEDELETEARRAY(rulDef3)
|
---|
1296 | SAFEDELETEARRAY(transTable)
|
---|
1297 | SAFEDELETEARRAY(parentRules)
|
---|
1298 | SAFEDELETEARRAY(parentsIn)
|
---|
1299 | SAFEDELETEARRAY(parentsOut)
|
---|
1300 | SAFEDELETEARRAY(fuzzySets1)
|
---|
1301 | SAFEDELETEARRAY(fuzzySets2)
|
---|
1302 | SAFEDELETEARRAY(fuzzySets3)
|
---|
1303 | if(rulesBody1) for(i=0;i<rulesNr1;i++) SAFEDELETEARRAY(rulesBody1[i])
|
---|
1304 | if(rulesBody2) for(i=0;i<rulesNr2;i++) SAFEDELETEARRAY(rulesBody2[i])
|
---|
1305 | SAFEDELETEARRAY(rulesBody1)
|
---|
1306 | SAFEDELETEARRAY(rulesBody2)
|
---|
1307 |
|
---|
1308 | return GENOPER_OK;
|
---|
1309 | };
|
---|
1310 |
|
---|
1311 |
|
---|
1312 |
|
---|