[193] | 1 | #include <math.h> //HUGE_VAL |
---|
| 2 | #include "geno_f0Fuzzy.h" |
---|
| 3 | #include "neuroimpl-fuzzy.h" |
---|
| 4 | #include "neuroimpl-fuzzy-f0.h" |
---|
| 5 | #include "rndutil.h" |
---|
| 6 | #include "model.h" |
---|
| 7 | |
---|
| 8 | #define FIELDSTRUCT Geno_f0Fuzzy |
---|
| 9 | static ParamEntry GENO7param_tab[]= //external access to f0Fuzzy genetic parameters |
---|
| 10 | { |
---|
| 11 | {"Genetics: f0-fuzzy",1,8,}, |
---|
| 12 | {"f0Fuzzy_maxSets",0,0,"Max. sets","d 0 999",FIELD(maximumSetsNr),"Maximum number of fuzzy sets",}, |
---|
| 13 | {"f0Fuzzy_maxRules",0,0,"Max. rules","d 0 999",FIELD(maximumRulesNr),"Maximum number of fuzzy rules",}, |
---|
| 14 | {"f0Fuzzy_prob0",0,0,"Add new fuzzy set (with simple rule)","f 0 1",FIELD(probtab[F0Fuzzy_ADDSET]),"Probability of adding new fuzzy set with simple rule, which uses this set (1=proceed on all genes, 0.1=proceed on ten percent)",}, |
---|
| 15 | {"f0Fuzzy_prob1",0,0,"Remove fuzzy set","f 0 1",FIELD(probtab[F0Fuzzy_REMSET]),"Probability of removing fuzzy set (1=proceed on all genes, 0.1=proceed on ten percent)",}, |
---|
| 16 | {"f0Fuzzy_prob2",0,0,"Add new rule","f 0 1",FIELD(probtab[F0Fuzzy_ADDRULE]),"Probability of adding new rule (1=proceed on all genes, 0.1=proceed on ten percent)",}, |
---|
| 17 | {"f0Fuzzy_prob3",0,0,"Remove rule","f 0 1",FIELD(probtab[F0Fuzzy_REMRULE]),"Probability of removing rule (1=proceed on all genes, 0.1=proceed on ten percent)",}, |
---|
| 18 | {"f0Fuzzy_prob4",0,0,"Add new input/output to existing rule","f 0 1",FIELD(probtab[F0Fuzzy_MODRULE]),"Probability of adding new input or output to exisitng rule (1=proceed on all genes, 0.1=proceed on ten percent)",}, |
---|
| 19 | {"f0Fuzzy_prob5",0,0,"Remove input/output from existing rule","f 0 1",FIELD(probtab[F0Fuzzy_MOD2RULE]),"Probability of removing input or output from exisitng rule (1=proceed on all genes, 0.1=proceed on ten percent)",}, |
---|
| 20 | {0,}, |
---|
| 21 | }; |
---|
| 22 | #undef FIELDSTRUCT |
---|
| 23 | |
---|
| 24 | Geno_f0Fuzzy::Geno_f0Fuzzy() |
---|
| 25 | { |
---|
| 26 | par.setParamTab(GENO7param_tab); |
---|
| 27 | par.select(this); |
---|
| 28 | supported_format='0'; |
---|
| 29 | name="Fuzzy control system"; |
---|
| 30 | maximumSetsNr=50; |
---|
| 31 | maximumRulesNr=100; |
---|
| 32 | probtab[F0Fuzzy_ADDSET] = 0.01; |
---|
| 33 | probtab[F0Fuzzy_REMSET] = 0.0112; |
---|
| 34 | probtab[F0Fuzzy_ADDRULE]= 0.01; |
---|
| 35 | probtab[F0Fuzzy_REMRULE]= 0.0222; //when new set is created, new rule (using this new set) is also created but when rule is removed, unused set are removed too |
---|
| 36 | probtab[F0Fuzzy_MODRULE] = 0.005; |
---|
| 37 | probtab[F0Fuzzy_MOD2RULE] = 0.005; |
---|
| 38 | } |
---|
| 39 | |
---|
| 40 | char *Geno_f0Fuzzy::getSimplest() |
---|
| 41 | { |
---|
| 42 | return "p:\np:1\nj:0,1\nn:d=\"G\",j=0\nn:d=\"|\",j=0\nn:d=\"Fuzzy: ns=1, nr=1, fs=-1;0;0;1;, fr=0;0:0;0/\"\nn:d=\"ChSel:ch=0\"\nc:2, 0\nc:3, 2\nc:1, 3\n"; |
---|
| 43 | }; |
---|
| 44 | |
---|
| 45 | int Geno_f0Fuzzy::markDuplicatedSets(const double fuzzySets1[], const int setsNr1, const double fuzzySets2[], const int setsNr2, int transTable[], const int setsNr3) |
---|
| 46 | { |
---|
| 47 | if(setsNr1+setsNr2!=setsNr3) return -1; |
---|
| 48 | int i, j; |
---|
| 49 | for(i=0;i<setsNr1;i++) |
---|
| 50 | for(j=0;j<setsNr2;j++) |
---|
| 51 | if((fuzzySets1[4*i]==fuzzySets2[4*j])&&(fuzzySets1[4*i+1]==fuzzySets2[4*j+1])&& |
---|
| 52 | (fuzzySets1[4*i+2]==fuzzySets2[4*j+2])&&(fuzzySets1[4*i+3]==fuzzySets2[4*j+3])) |
---|
| 53 | transTable[setsNr1+j]=i; //mark equal sets |
---|
| 54 | return 0; |
---|
| 55 | } |
---|
| 56 | |
---|
| 57 | |
---|
| 58 | int Geno_f0Fuzzy::nearestSet(double set[4], double sets[], int setsNr) |
---|
| 59 | { |
---|
| 60 | int i, nearest=0; |
---|
| 61 | double disCur, disNear; |
---|
| 62 | |
---|
| 63 | disCur=disNear=10; //the largest distance i between -1;-1;-1;-1 and 1;1;1;1, and equals 8. |
---|
| 64 | for(i=0;i<setsNr;i++) |
---|
| 65 | { |
---|
| 66 | disCur=fabs(sets[4*i]-set[0])+fabs(sets[4*i+1]-set[1])+ |
---|
| 67 | fabs(sets[4*i+2]-set[2])+fabs(sets[4*i+3]-set[3]); |
---|
| 68 | if(disCur<disNear){ nearest=i; disNear=disCur; } |
---|
| 69 | } |
---|
| 70 | |
---|
| 71 | return nearest; |
---|
| 72 | } |
---|
| 73 | |
---|
| 74 | int Geno_f0Fuzzy::changeSetsNumeration(SString &rules, int transTable[], int nrItems) |
---|
| 75 | { |
---|
| 76 | //for each rule (from rules string), change number of fuzzy set into new one |
---|
| 77 | int pos=0; |
---|
| 78 | SString oneRule, newRules; |
---|
| 79 | while(rules.getNextToken(pos, oneRule, '/')) |
---|
| 80 | { |
---|
| 81 | SString cond, dec, nrStr; |
---|
| 82 | int p=0, setNr; |
---|
| 83 | char temp[10]; |
---|
| 84 | oneRule.getNextToken(p, cond, ':'); |
---|
| 85 | oneRule.getNextToken(p, dec, '/'); |
---|
| 86 | p=0; |
---|
| 87 | while(cond.getNextToken(p, nrStr, ';')) //first: input number |
---|
| 88 | { |
---|
| 89 | newRules += nrStr; newRules += ";"; |
---|
| 90 | cond.getNextToken(p, nrStr, ';'); //then fuzzy set nr |
---|
| 91 | if((setNr=atoi(nrStr))>=nrItems) |
---|
| 92 | sprintf(temp, "%i", setNr); //might occur when new fuzzy set and new fuzzy rule added - does not need to be transformated |
---|
| 93 | else |
---|
| 94 | sprintf(temp, "%i", transTable[setNr]); //transformate set number |
---|
| 95 | newRules += temp; |
---|
| 96 | if(p<cond.len()) |
---|
| 97 | newRules += ";"; |
---|
| 98 | } |
---|
| 99 | p=0; newRules += ":"; |
---|
| 100 | while(dec.getNextToken(p, nrStr, ';')) //first: output number |
---|
| 101 | { |
---|
| 102 | newRules += nrStr; newRules += ";"; |
---|
| 103 | dec.getNextToken(p, nrStr, ';'); //then fuzzy set nr |
---|
| 104 | if((setNr=atoi(nrStr))>=nrItems) |
---|
| 105 | sprintf(temp, "%i", setNr); //might occur when new fuzzy set and new fuzzy rule added - does not need to be transformated |
---|
| 106 | else |
---|
| 107 | sprintf(temp, "%i", transTable[setNr]); //transformate set number |
---|
| 108 | newRules += temp; |
---|
| 109 | if(p<dec.len()) |
---|
| 110 | newRules += ";"; |
---|
| 111 | } |
---|
| 112 | newRules += "/"; |
---|
| 113 | } |
---|
| 114 | |
---|
| 115 | rules=newRules; |
---|
| 116 | return 0; |
---|
| 117 | } |
---|
| 118 | |
---|
| 119 | int Geno_f0Fuzzy::removeUnusedSets(SString &sets, SString rules, int &setsNr, int transTable[]) |
---|
| 120 | { |
---|
| 121 | //for each rule (from rules string), change number of fuzzy set into new one |
---|
| 122 | int pos=0, i, nrUsedSets, *transTableOryginal = new int[setsNr]; |
---|
| 123 | bool *setUsed = new bool[setsNr], unusedPresent; |
---|
| 124 | SString oneRule, newSets, nrStr; |
---|
| 125 | for(i=0;i<setsNr;i++) { setUsed[i]=false; transTableOryginal[i]=transTable[i];} //copy oryginal values of trans table |
---|
| 126 | |
---|
| 127 | //mark used sets |
---|
| 128 | while(rules.getNextToken(pos, oneRule, '/')) |
---|
| 129 | { |
---|
| 130 | SString cond, dec; |
---|
| 131 | int p=0, setNr; |
---|
| 132 | oneRule.getNextToken(p, cond, ':'); |
---|
| 133 | oneRule.getNextToken(p, dec, '/'); |
---|
| 134 | p=0; |
---|
| 135 | while(cond.getNextToken(p, nrStr, ';')) //first: input number |
---|
| 136 | { |
---|
| 137 | cond.getNextToken(p, nrStr, ';'); //then fuzzy set nr |
---|
| 138 | setNr=atoi(nrStr); |
---|
| 139 | if((setNr>=setsNr)||(setNr<0)) setNr=randomN(setsNr); //if everything ok, impossible to happen |
---|
| 140 | setUsed[setNr]=true; |
---|
| 141 | } |
---|
| 142 | p=0; |
---|
| 143 | while(dec.getNextToken(p, nrStr, ';')) //first: output number |
---|
| 144 | { |
---|
| 145 | dec.getNextToken(p, nrStr, ';'); //then fuzzy set nr |
---|
| 146 | setNr=atoi(nrStr); |
---|
| 147 | if((setNr>=setsNr)||(setNr<0)) setNr=randomN(setsNr); //if everything ok,impossible to happen |
---|
| 148 | setUsed[setNr]=true; |
---|
| 149 | } |
---|
| 150 | } |
---|
| 151 | |
---|
| 152 | for(i=0, nrUsedSets=0, unusedPresent=false;i<setsNr;i++) |
---|
| 153 | if(setUsed[i]==false) |
---|
| 154 | { |
---|
| 155 | unusedPresent=true; |
---|
| 156 | //change numbers in transTable - some set will be removed, so further renumeration is needed |
---|
| 157 | for(int j=0;j<setsNr;j++) if(transTableOryginal[j]>i) transTable[j]--; |
---|
| 158 | } |
---|
| 159 | else |
---|
| 160 | nrUsedSets++; |
---|
| 161 | |
---|
| 162 | SAFEDELETEARRAY(transTableOryginal) |
---|
| 163 | |
---|
| 164 | if(!unusedPresent) |
---|
| 165 | { |
---|
| 166 | SAFEDELETEARRAY(setUsed) |
---|
| 167 | return 0; //all sets are necessery |
---|
| 168 | } |
---|
| 169 | |
---|
| 170 | //remove from new fuzzy sets unused sets |
---|
| 171 | pos=0; |
---|
| 172 | newSets=""; |
---|
| 173 | int semicol=0, nrOfSet=0; |
---|
| 174 | SString tempSet=""; |
---|
| 175 | while(sets.getNextToken(pos, nrStr, ';')) |
---|
| 176 | { |
---|
| 177 | tempSet += nrStr; tempSet += ';'; |
---|
| 178 | if(++semicol==4) |
---|
| 179 | { |
---|
| 180 | if(setUsed[nrOfSet]) |
---|
| 181 | newSets += tempSet; |
---|
| 182 | tempSet=""; |
---|
| 183 | semicol=0; |
---|
| 184 | nrOfSet++; |
---|
| 185 | } |
---|
| 186 | } |
---|
| 187 | |
---|
| 188 | setsNr=nrUsedSets; |
---|
| 189 | sets=newSets; |
---|
| 190 | |
---|
| 191 | SAFEDELETEARRAY(setUsed) |
---|
| 192 | |
---|
| 193 | return 1; |
---|
| 194 | } |
---|
| 195 | |
---|
| 196 | int Geno_f0Fuzzy::removeExcessiveInOut(SString &rules, int inputsNr, int outputsNr) |
---|
| 197 | { |
---|
| 198 | SString newRules, oneRule; |
---|
| 199 | int pos, i; |
---|
| 200 | char tempChar50[50]; |
---|
| 201 | |
---|
| 202 | pos=0; |
---|
| 203 | while(rules.getNextToken(pos, oneRule, '/')) |
---|
| 204 | { |
---|
| 205 | SString cond, dec, nrStr, newInput, newOutput; |
---|
| 206 | int p=0; |
---|
| 207 | bool *usedInOut, first; |
---|
| 208 | |
---|
| 209 | oneRule.getNextToken(p, cond, ':'); |
---|
| 210 | oneRule.getNextToken(p, dec, '/'); |
---|
| 211 | |
---|
| 212 | //create input table |
---|
| 213 | usedInOut = new bool[inputsNr]; for(i=0;i<inputsNr;i++) usedInOut[i]=false; |
---|
| 214 | //create new rule, which omits double inputs |
---|
| 215 | p=0; newInput=""; first=true; |
---|
| 216 | while(cond.getNextToken(p, nrStr, ';')) //first: input number |
---|
| 217 | { |
---|
| 218 | int inNr=atoi(nrStr), setNr; |
---|
| 219 | cond.getNextToken(p, nrStr, ';'); //then fuzzy set nr |
---|
| 220 | setNr=atoi(nrStr); |
---|
| 221 | if(!usedInOut[inNr]) //not used yet |
---|
| 222 | { |
---|
| 223 | if(!first) newInput += ';'; |
---|
| 224 | first=false; |
---|
| 225 | sprintf(tempChar50, "%i;%i", inNr, setNr); |
---|
| 226 | newInput += tempChar50; |
---|
| 227 | usedInOut[inNr]=true; |
---|
| 228 | } |
---|
| 229 | } |
---|
| 230 | SAFEDELETEARRAY(usedInOut) |
---|
| 231 | |
---|
| 232 | //create output table |
---|
| 233 | usedInOut = new bool[outputsNr]; for(i=0;i<outputsNr;i++) usedInOut[i]=false; |
---|
| 234 | //create new rule, which omits double outputs |
---|
| 235 | p=0; newOutput=""; first=true; |
---|
| 236 | while(dec.getNextToken(p, nrStr, ';')) //first: output number |
---|
| 237 | { |
---|
| 238 | int outNr=atoi(nrStr), setNr; |
---|
| 239 | dec.getNextToken(p, nrStr, ';'); //then fuzzy set nr |
---|
| 240 | setNr=atoi(nrStr); |
---|
| 241 | if(!usedInOut[outNr]) //not used yet |
---|
| 242 | { |
---|
| 243 | if(!first) newOutput += ';'; |
---|
| 244 | first=false; |
---|
| 245 | sprintf(tempChar50, "%i;%i", outNr, setNr); |
---|
| 246 | newOutput += tempChar50; |
---|
| 247 | usedInOut[outNr]=true; |
---|
| 248 | } |
---|
| 249 | } |
---|
| 250 | SAFEDELETEARRAY(usedInOut) |
---|
| 251 | |
---|
| 252 | newRules += newInput + ":" + newOutput + "/"; |
---|
| 253 | } |
---|
| 254 | |
---|
| 255 | rules=newRules; |
---|
| 256 | |
---|
| 257 | return 0; |
---|
| 258 | } |
---|
| 259 | |
---|
| 260 | int Geno_f0Fuzzy::removeExcessiveRules(SString &rules, int setsNr, int &rulesNr) |
---|
| 261 | { |
---|
| 262 | int *rulDef, //for each rule, remembers number of inputs and number of outputs used (in rule) |
---|
| 263 | **rulesBody, //for each rule, remembers: nr input, nr fuzzy set ... nr output, nr fuzzy set ... |
---|
| 264 | i, j, k, l, nrRulesToRemove, pos, unimpTemp; |
---|
| 265 | const int original_rulesNr=rulesNr; |
---|
| 266 | bool *rulesToRemove = new bool[original_rulesNr]; |
---|
| 267 | SString newRules, oneRule; |
---|
| 268 | |
---|
| 269 | for(i=0;i<original_rulesNr;i++) rulesToRemove[i]=false; |
---|
| 270 | //create space for rules definition: number of inputs and outputs for each rule |
---|
| 271 | rulDef = new int[2*original_rulesNr]; |
---|
| 272 | if(FuzzyF0String::countInputsOutputs(rules, rulDef, original_rulesNr)) |
---|
| 273 | { |
---|
| 274 | SAFEDELETEARRAY(rulDef) |
---|
| 275 | SAFEDELETEARRAY(rulesToRemove) |
---|
| 276 | return -1; //error while parsing rules string |
---|
| 277 | } |
---|
| 278 | //create space for rules |
---|
| 279 | rulesBody = new int*[original_rulesNr]; //list of rules that will contain rules body |
---|
| 280 | for (i=0;i<original_rulesNr;i++) rulesBody[i] = new int[2*(rulDef[2*i]+rulDef[2*i+1])]; //each rule can have different number of inputs and outputs |
---|
| 281 | //get from string rules body into integer variables |
---|
| 282 | if(FuzzyF0String::convertStrToRules(rules, rulDef, rulesBody, setsNr, original_rulesNr, unimpTemp)) |
---|
| 283 | { |
---|
| 284 | SAFEDELETEARRAY(rulDef) |
---|
| 285 | if(rulesBody) for(i=0;i<original_rulesNr;i++) SAFEDELETEARRAY(rulesBody[i]) |
---|
| 286 | SAFEDELETEARRAY(rulesBody) |
---|
| 287 | SAFEDELETEARRAY(rulesToRemove) |
---|
| 288 | return -2; //error while parsing rules string |
---|
| 289 | } |
---|
| 290 | |
---|
| 291 | nrRulesToRemove=0; |
---|
| 292 | for(i=0;i<original_rulesNr;i++) //for every rule... |
---|
| 293 | for(j=i+1;j<original_rulesNr;j++) //...compare with further rule's... |
---|
| 294 | { |
---|
| 295 | int similarity=0; |
---|
| 296 | if(rulDef[2*j]!=rulDef[2*i]) continue;// do not check rules with different number of inputs |
---|
| 297 | for(k=0;k<rulDef[2*i];k++) //..conditional part rule i |
---|
| 298 | for(l=0;l<rulDef[2*j];l++) //..conditional part rule j |
---|
| 299 | if((rulesBody[i][k]==rulesBody[j][l])&&(rulesBody[i][k+1]==rulesBody[j][l+1])) //if inputs nr and fuzzy sets nr are the same |
---|
| 300 | similarity++; //increase similarity number |
---|
| 301 | //every input and fuzzy set number of rule j equals input and fuzzy set nr of rule i |
---|
| 302 | if((similarity==rulDef[2*j])&&(similarity==rulDef[2*i])) |
---|
| 303 | { |
---|
| 304 | if(!rulesToRemove[j]) nrRulesToRemove++; //because might happen, that rule is mark to remove more than once |
---|
| 305 | rulesToRemove[j]=true; |
---|
| 306 | } |
---|
| 307 | } |
---|
| 308 | |
---|
| 309 | if(nrRulesToRemove>=original_rulesNr) //in fact, it is impossible; but it's safe to protect |
---|
| 310 | { |
---|
| 311 | SAFEDELETEARRAY(rulDef) |
---|
| 312 | if(rulesBody) for(i=0;i<original_rulesNr;i++) SAFEDELETEARRAY(rulesBody[i]) |
---|
| 313 | SAFEDELETEARRAY(rulesBody) |
---|
| 314 | SAFEDELETEARRAY(rulesToRemove) |
---|
| 315 | return -3; //error while comparing rules |
---|
| 316 | } |
---|
| 317 | |
---|
| 318 | if(nrRulesToRemove>0) |
---|
| 319 | { |
---|
| 320 | int nrOfRule=0; |
---|
| 321 | //copy rules, which are not to be removed |
---|
| 322 | pos=0; newRules=""; |
---|
| 323 | while(rules.getNextToken(pos, oneRule, '/')) |
---|
| 324 | if(!rulesToRemove[nrOfRule++]) newRules += oneRule + "/"; |
---|
| 325 | rulesNr -= nrRulesToRemove; |
---|
| 326 | rules = newRules; |
---|
| 327 | } |
---|
| 328 | |
---|
| 329 | SAFEDELETEARRAY(rulDef) |
---|
| 330 | if(rulesBody) for(i=0;i<original_rulesNr;i++) SAFEDELETEARRAY(rulesBody[i]) |
---|
| 331 | SAFEDELETEARRAY(rulesBody) |
---|
| 332 | SAFEDELETEARRAY(rulesToRemove) |
---|
| 333 | |
---|
| 334 | return 0; |
---|
| 335 | }; |
---|
| 336 | |
---|
| 337 | int Geno_f0Fuzzy::sortSet(double set[4]) |
---|
| 338 | { |
---|
| 339 | int i,j; |
---|
| 340 | double fTemp; |
---|
| 341 | for(i=0;i<4;i++) |
---|
| 342 | { |
---|
| 343 | if(set[i]>1) set[i]=1; |
---|
| 344 | if(set[i]<-1) set[i]=-1; |
---|
| 345 | for(j=0;j<4;j++) |
---|
| 346 | if((i>j)&&(set[i]<set[j])) |
---|
| 347 | {fTemp=set[i];set[i]=set[j];set[j]=fTemp;}; |
---|
| 348 | } |
---|
| 349 | return 0; |
---|
| 350 | } |
---|
| 351 | |
---|
| 352 | int Geno_f0Fuzzy::computeSet(double newSet[4]) |
---|
| 353 | { //parameters: most probably size of support and core |
---|
| 354 | double core = min(fabs(0.15+0.25*RndGen.GaussStd()), 2.0), //core can not be bigger 2 |
---|
| 355 | coreStart = RndGen.Uni(-1,1); |
---|
| 356 | |
---|
| 357 | if(0.5<rnd01) |
---|
| 358 | { |
---|
| 359 | newSet[0] = coreStart - min(fabs(0.15*RndGen.GaussStd()), 2.0); |
---|
| 360 | newSet[1] = coreStart; |
---|
| 361 | newSet[2] = newSet[1] + core; |
---|
| 362 | newSet[3] = newSet[2] + min(fabs(0.15*RndGen.GaussStd()), 2.0); |
---|
| 363 | } |
---|
| 364 | else |
---|
| 365 | { |
---|
| 366 | newSet[2] = coreStart; |
---|
| 367 | newSet[3] = newSet[2] + min(fabs(0.15*RndGen.GaussStd()), 2.0); |
---|
| 368 | newSet[1] = newSet[2] - core; |
---|
| 369 | newSet[0] = newSet[1] - min(fabs(0.15*RndGen.GaussStd()), 2.0); |
---|
| 370 | } |
---|
| 371 | |
---|
| 372 | sortSet(newSet); |
---|
| 373 | |
---|
| 374 | return 0; |
---|
| 375 | } |
---|
| 376 | |
---|
| 377 | int Geno_f0Fuzzy::mutate(char *&g, float &chg,int &method) |
---|
| 378 | { |
---|
| 379 | int const maxTrialNr=10; //maximum number of mutating trial, if for some reason drawed mutation can not be done |
---|
| 380 | SString fuzzyGeno, finalGenotype, tok, newRulesStr, newSetsStr; |
---|
| 381 | int newSetsNr, newRulesNr; |
---|
| 382 | int i, pos, genoUsed, genoAdded, genoRemoved, nrTrials; |
---|
| 383 | int *transTable; |
---|
| 384 | char tempChar50[50]; |
---|
| 385 | bool mutated; |
---|
| 386 | |
---|
| 387 | Model model(Geno(g, '0')); //create a model from genotype |
---|
| 388 | Neuro *fuzzy=findNeuro(&model, Neuro::getClass("Fuzzy")); |
---|
| 389 | if (!fuzzy) return GENOPER_OPFAIL; //if not present, fail |
---|
| 390 | const int inputsNr=fuzzy->getInputCount(); //get number of inputs |
---|
| 391 | const int outputsNr=NI_FuzzyNeuro::countOuts(&model, fuzzy); //count number of outputs |
---|
| 392 | |
---|
| 393 | //get neuron four properties |
---|
| 394 | SyntParam pi=fuzzy->classProperties(); |
---|
| 395 | model.open(); |
---|
| 396 | const int setsNr=pi.getIntById("ns"); |
---|
| 397 | const int rulesNr=pi.getIntById("nr"); |
---|
| 398 | const SString setsStr=pi.getStringById("fs"); |
---|
| 399 | const SString rulesStr=pi.getStringById("fr"); |
---|
| 400 | |
---|
| 401 | if((inputsNr<=0)||(outputsNr<=0)|| |
---|
| 402 | (setsStr.len()==0)||(rulesStr.len()==0)||(setsNr<=0)||(rulesNr<=0)) return GENOPER_OPFAIL; //ERROR |
---|
| 403 | |
---|
| 404 | //find out the real length of genotype |
---|
| 405 | fuzzyGeno = setsStr+", "+rulesStr; |
---|
| 406 | genoRemoved=genoAdded=genoUsed=0; //1 geno is i.e. -0.325; but this are 7 characters! so, 1 is used, 6 are unused |
---|
| 407 | for(i=0;i<fuzzyGeno.len();i++) //count genes in fuzzy genotype |
---|
| 408 | if((fuzzyGeno[i]==';')||(fuzzyGeno[i]=='/')||(fuzzyGeno[i]==':')) genoUsed++; |
---|
| 409 | |
---|
| 410 | //mutation - drawing |
---|
| 411 | mutated=false; |
---|
| 412 | for(nrTrials=0;(nrTrials<maxTrialNr)&&(!mutated);nrTrials++) |
---|
| 413 | { |
---|
| 414 | newSetsStr=""; newRulesStr=""; newSetsNr=0; newRulesNr=0; |
---|
| 415 | switch(method=roulette(probtab, F0Fuzzy_COUNT)) |
---|
| 416 | { |
---|
| 417 | case F0Fuzzy_ADDSET: //add new fuzzy set |
---|
| 418 | if(setsNr>=maximumSetsNr) break; |
---|
| 419 | double newSetD[4]; |
---|
| 420 | computeSet(newSetD); //draw set and rank rising |
---|
| 421 | if(sprintf(tempChar50, "%.4lf;%.4lf;%.4lf;%.4lf;", newSetD[0], newSetD[1], newSetD[2], newSetD[3]) != EOF) //in fact, always true |
---|
| 422 | { |
---|
| 423 | newSetsStr = setsStr + tempChar50; |
---|
| 424 | //add new rule, using fresh new created fuzzy set (in premise part) - prevents removing of new fuzzy set |
---|
| 425 | if((sprintf(tempChar50, "%i;%i:%i;%i/", randomN(inputsNr), setsNr, randomN(outputsNr), randomN(setsNr+1)) != EOF)&& //in fact, always true; but if not, nothing wrong happens |
---|
| 426 | (rulesNr<maximumRulesNr)) |
---|
| 427 | { newRulesStr = rulesStr + tempChar50; newRulesNr=rulesNr+1; genoAdded+=4; } |
---|
| 428 | newSetsNr=setsNr+1; //one more fuzzy set |
---|
| 429 | genoAdded+=4; //four gens added |
---|
| 430 | mutated=true; |
---|
| 431 | } |
---|
| 432 | break; |
---|
| 433 | case F0Fuzzy_REMSET:{ //remove existing fuzzy set |
---|
| 434 | if(setsNr<=1) break; |
---|
| 435 | int setToRemove=randomN(setsNr), foundSetsPartNr=0; |
---|
| 436 | pos=0; |
---|
| 437 | //copy sets before set to remove |
---|
| 438 | while((foundSetsPartNr!=4*setToRemove)&&(setsStr.getNextToken(pos, tok, ';'))) |
---|
| 439 | { newSetsStr += tok + ";"; foundSetsPartNr++; } |
---|
| 440 | double removedSet[4]; |
---|
| 441 | //omit four numbers - one fuzzy set - and remember parameters of removed set |
---|
| 442 | for(int ii=0;(ii<4)&&(setsStr.getNextToken(pos, tok, ';'));ii++) removedSet[ii]=atoi(tok); |
---|
| 443 | //copy sets after set to remove |
---|
| 444 | while(setsStr.getNextToken(pos, tok, ';')) |
---|
| 445 | { newSetsStr += tok + ";"; foundSetsPartNr++; } |
---|
| 446 | newSetsNr=setsNr-1; |
---|
| 447 | newRulesNr=rulesNr; |
---|
| 448 | //find the nearest set to removed one |
---|
| 449 | double *newSets = new double[4*setsNr]; |
---|
| 450 | if(FuzzyF0String::convertStrToSets(newSetsStr, newSets, newSetsNr)!=0) |
---|
| 451 | { SAFEDELETEARRAY(newSets) break; } |
---|
| 452 | transTable = new int[setsNr]; |
---|
| 453 | for(int ii=0;ii<setToRemove;ii++) transTable[ii] = ii; |
---|
| 454 | for(int ii=setToRemove;ii<setsNr;ii++) transTable[ii] = ii-1; //transformate |
---|
| 455 | transTable[setToRemove]=nearestSet(removedSet, newSets, newSetsNr); //in rules, replace removed set with found nearest |
---|
| 456 | SAFEDELETEARRAY(newSets) |
---|
| 457 | //transformate old fuzzy sets number into new fuzzy sets number, according to transTable table |
---|
| 458 | newRulesStr=rulesStr; |
---|
| 459 | changeSetsNumeration(newRulesStr, transTable, setsNr); |
---|
| 460 | SAFEDELETEARRAY(transTable) |
---|
| 461 | //remove inputs/outputs which are unnecessery |
---|
| 462 | //remove rules which are unnecessery: conditional part must be unique |
---|
| 463 | //CAUTION: rules string and number of rules might change |
---|
| 464 | if((removeExcessiveInOut(newRulesStr, inputsNr, outputsNr)<0)|| |
---|
| 465 | (removeExcessiveRules(newRulesStr, newSetsNr, newRulesNr)<0)) |
---|
| 466 | break; |
---|
| 467 | genoRemoved+=4; |
---|
| 468 | mutated=true; |
---|
| 469 | break; |
---|
| 470 | } |
---|
| 471 | case F0Fuzzy_ADDRULE:{ //add new fuzzy rule |
---|
| 472 | if(rulesNr>=maximumRulesNr) break; |
---|
| 473 | SString tempSString; |
---|
| 474 | bool ruleOk=true; |
---|
| 475 | int nrIns=1+randomN(inputsNr), //draw number of inputs between {1,..,inputsNr} |
---|
| 476 | nrOuts=1+randomN(outputsNr); //draw number of outputs between {1,..,outputsNr} |
---|
| 477 | for(i=0;((i<(nrIns+nrOuts))&&(ruleOk));i++) |
---|
| 478 | if(sprintf(tempChar50, "%i;%i", (i<nrIns)?randomN(inputsNr):randomN(outputsNr), randomN(setsNr)) != EOF) //write: in/out nr ; fuzzy set nr |
---|
| 479 | { |
---|
| 480 | tempSString += tempChar50; |
---|
| 481 | if(i+1==nrIns) //end of conditional part |
---|
| 482 | tempSString += ':'; |
---|
| 483 | else if (i+1==nrIns+nrOuts) //end of rule |
---|
| 484 | tempSString += '/'; |
---|
| 485 | else |
---|
| 486 | tempSString += ';'; |
---|
| 487 | } |
---|
| 488 | else |
---|
| 489 | ruleOk = false; //error while transformating, do not add this rule |
---|
| 490 | if(ruleOk) |
---|
| 491 | { |
---|
| 492 | tempSString = tempSString + rulesStr; |
---|
| 493 | int temp_newRulesNr = rulesNr+1; |
---|
| 494 | if((removeExcessiveInOut(tempSString, inputsNr, outputsNr)<0)|| |
---|
| 495 | (removeExcessiveRules(tempSString, setsNr, temp_newRulesNr)<0)|| |
---|
| 496 | (temp_newRulesNr != rulesNr+1)) //new added rule was removed, so there was no mutation in fact! |
---|
| 497 | break; |
---|
| 498 | newSetsStr = setsStr; newSetsNr = setsNr;//do not change sets |
---|
| 499 | newRulesStr = tempSString; newRulesNr = temp_newRulesNr; //replace with new one |
---|
| 500 | genoAdded+=2*(nrIns+outputsNr); //gens added: input, set, ... , output, set, ... |
---|
| 501 | mutated=true; |
---|
| 502 | } |
---|
| 503 | break; |
---|
| 504 | } |
---|
| 505 | case F0Fuzzy_REMRULE:{ //remove existing fuzzy rule |
---|
| 506 | if(rulesNr<=1) break; |
---|
| 507 | int ruleToRemove=randomN(rulesNr), foundRuleNr=0; |
---|
| 508 | pos=0; |
---|
| 509 | //copy rules before rule to remove |
---|
| 510 | while((foundRuleNr!=ruleToRemove)&&(rulesStr.getNextToken(pos, tok, '/'))) |
---|
| 511 | { newRulesStr += tok + "/"; foundRuleNr++; } |
---|
| 512 | //omit this rule |
---|
| 513 | rulesStr.getNextToken(pos, tok, '/'); |
---|
| 514 | for(int ii=0;ii<tok.len();ii++) if((tok[ii]==';')||(tok[ii]==':')||(tok[ii]=='/')) genoRemoved++; |
---|
| 515 | //copy rules after rule to remove |
---|
| 516 | while(rulesStr.getNextToken(pos, tok, '/')) |
---|
| 517 | { newRulesStr += tok + "/"; foundRuleNr++; } |
---|
| 518 | newRulesNr = rulesNr-1; |
---|
| 519 | newSetsNr = setsNr; newSetsStr = setsStr; |
---|
| 520 | // after removing of the rule, an unused fuzzy set(s) may occur |
---|
| 521 | //create space for new transformation table |
---|
| 522 | int *transTable = new int [newSetsNr]; |
---|
| 523 | for(int ii=0;ii<newSetsNr;ii++) transTable[ii]=ii; //formula 1:1 - no renumeration needed now |
---|
| 524 | int oldSetNr=newSetsNr; //remember number of sets used in new genotype, but before reduction |
---|
| 525 | //remove unused sets; if any set was removed, renumeration is needed |
---|
| 526 | if(removeUnusedSets(newSetsStr, newRulesStr, newSetsNr, transTable)) |
---|
| 527 | changeSetsNumeration(newRulesStr, transTable, oldSetNr); //renumerate new sets |
---|
| 528 | SAFEDELETEARRAY(transTable); |
---|
| 529 | mutated=true; |
---|
| 530 | break; |
---|
| 531 | } |
---|
| 532 | case F0Fuzzy_MODRULE:{ //modify fuzzy rule: add new input/output |
---|
| 533 | int ruleToChange=randomN(rulesNr), foundRuleNr=0; |
---|
| 534 | SString modRule, cond, dec, tempStr; |
---|
| 535 | pos=0; |
---|
| 536 | //copy rules before rule to change |
---|
| 537 | while((foundRuleNr!=ruleToChange)&&(rulesStr.getNextToken(pos, tok, '/'))) |
---|
| 538 | { newRulesStr += tok + "/"; foundRuleNr++; } |
---|
| 539 | //change this rule |
---|
| 540 | rulesStr.getNextToken(pos, modRule, '/'); |
---|
| 541 | //copy rules after rule to remove |
---|
| 542 | while(rulesStr.getNextToken(pos, tok, '/')) |
---|
| 543 | { newRulesStr += tok + "/"; foundRuleNr++; } |
---|
| 544 | pos=0; |
---|
| 545 | modRule.getNextToken(pos, cond, ':'); |
---|
| 546 | modRule.getNextToken(pos, dec, '/'); |
---|
| 547 | if(0.5<rnd01) //add input |
---|
| 548 | { if(sprintf(tempChar50, ";%i;%i", randomN(inputsNr), randomN(setsNr)) != EOF) //write: in nr ; fuzzy set nr |
---|
| 549 | cond += tempChar50; |
---|
| 550 | else break; |
---|
| 551 | } |
---|
| 552 | else //add output |
---|
| 553 | { if(sprintf(tempChar50, ";%i;%i", randomN(outputsNr), randomN(setsNr)) != EOF) //write: in nr ; fuzzy set nr |
---|
| 554 | dec += tempChar50; |
---|
| 555 | else break; |
---|
| 556 | } |
---|
| 557 | tempStr = newRulesStr + cond + ":" + dec + "/"; |
---|
| 558 | int temp_rulesNr = rulesNr; |
---|
| 559 | if((removeExcessiveInOut(tempStr, inputsNr, outputsNr)<0)|| |
---|
| 560 | (removeExcessiveRules(tempStr, setsNr, temp_rulesNr)<0)|| |
---|
| 561 | (temp_rulesNr != rulesNr)) //new added in/out caused duplicated rule, so this mutation is not ok - try other |
---|
| 562 | break; |
---|
| 563 | newRulesStr = tempStr; |
---|
| 564 | newRulesNr = rulesNr; newSetsStr = setsStr; newSetsNr = setsNr; |
---|
| 565 | genoAdded+=2; |
---|
| 566 | mutated=true; |
---|
| 567 | break; |
---|
| 568 | } |
---|
| 569 | case F0Fuzzy_MOD2RULE:{ //modify fuzzy rule: remove existing input/output |
---|
| 570 | int ruleToChange=randomN(rulesNr), foundRuleNr=0; |
---|
| 571 | SString modRule, cond, dec, tempStr; |
---|
| 572 | pos=0; |
---|
| 573 | //copy rules before rule to change |
---|
| 574 | while((foundRuleNr!=ruleToChange)&&(rulesStr.getNextToken(pos, tok, '/'))) |
---|
| 575 | { newRulesStr += tok + "/"; foundRuleNr++; } |
---|
| 576 | //change this rule |
---|
| 577 | rulesStr.getNextToken(pos, modRule, '/'); |
---|
| 578 | //copy rules after rule to remove |
---|
| 579 | while(rulesStr.getNextToken(pos, tok, '/')) |
---|
| 580 | { newRulesStr += tok + "/"; foundRuleNr++; } |
---|
| 581 | pos=0; |
---|
| 582 | modRule.getNextToken(pos, cond, ':'); |
---|
| 583 | modRule.getNextToken(pos, dec, '/'); |
---|
| 584 | pos=0; |
---|
| 585 | if(0.5<rnd01) //remove input |
---|
| 586 | { |
---|
| 587 | int nrIns=0; |
---|
| 588 | while(cond.getNextToken(pos, tok, ';'))nrIns++; |
---|
| 589 | nrIns = 1 + nrIns/2; //odd number of semicolons, so 1 + ... |
---|
| 590 | if(nrIns<=1) break; //can not remove - only one input! |
---|
| 591 | int nrInToRem=randomN(nrIns), insFound=0; |
---|
| 592 | //copy inputs before one to remove |
---|
| 593 | while((insFound<nrInToRem)&&(cond.getNextToken(pos, tok, ';'))) |
---|
| 594 | { |
---|
| 595 | if(insFound>0) tempStr += ";"; //add semic. before input number |
---|
| 596 | tempStr += tok + ";"; //input number |
---|
| 597 | cond.getNextToken(pos, tok, ';'); |
---|
| 598 | tempStr += tok; //set number |
---|
| 599 | insFound++; |
---|
| 600 | } |
---|
| 601 | if((!cond.getNextToken(pos, tok, ';'))||(!cond.getNextToken(pos, tok, ';'))) //ommit selected input |
---|
| 602 | break; //error |
---|
| 603 | //copy inputs after one to remove |
---|
| 604 | while(cond.getNextToken(pos, tok, ';')) |
---|
| 605 | { |
---|
| 606 | tempStr += ";"; tempStr += tok + ";"; //input number |
---|
| 607 | cond.getNextToken(pos, tok, ';'); |
---|
| 608 | tempStr += tok; //set number |
---|
| 609 | } |
---|
| 610 | modRule = newRulesStr + tempStr + ":" + dec + "/"; |
---|
| 611 | } |
---|
| 612 | else //remove output |
---|
| 613 | { |
---|
| 614 | int nrOuts=0; |
---|
| 615 | while(dec.getNextToken(pos, tok, ';'))nrOuts++; |
---|
| 616 | nrOuts = 1 + nrOuts/2; //odd number of semicolons, so 1 + ... |
---|
| 617 | if(nrOuts<=1) break; //can not remove - only one input! |
---|
| 618 | int nrOutToRem=randomN(nrOuts), outsFound=0; |
---|
| 619 | //copy outputs before one to remove |
---|
| 620 | while((outsFound<nrOutToRem)&&(dec.getNextToken(pos, tok, ';'))) |
---|
| 621 | { |
---|
| 622 | if(outsFound>0) tempStr += ";"; //add semic. before output number |
---|
| 623 | tempStr += tok + ";"; //output number |
---|
| 624 | dec.getNextToken(pos, tok, ';'); |
---|
| 625 | tempStr += tok; //set number |
---|
| 626 | outsFound++; |
---|
| 627 | } |
---|
| 628 | if((!dec.getNextToken(pos, tok, ';'))||(!dec.getNextToken(pos, tok, ';'))) //ommit selected output |
---|
| 629 | break; //error |
---|
| 630 | //copy outputs after one to remove |
---|
| 631 | while(dec.getNextToken(pos, tok, ';')) |
---|
| 632 | { |
---|
| 633 | tempStr += ";"; tempStr += tok + ";"; //output number |
---|
| 634 | dec.getNextToken(pos, tok, ';'); |
---|
| 635 | tempStr += tok; //set number |
---|
| 636 | } |
---|
| 637 | modRule = newRulesStr + cond + ":" + tempStr + "/"; |
---|
| 638 | } |
---|
| 639 | tempStr = newRulesStr + modRule; |
---|
| 640 | int temp_rulesNr = rulesNr; |
---|
| 641 | if((removeExcessiveInOut(tempStr, inputsNr, outputsNr)<0)|| |
---|
| 642 | (removeExcessiveRules(tempStr, setsNr, temp_rulesNr)<0)|| |
---|
| 643 | (temp_rulesNr != rulesNr)) //removed in/out caused duplicated rule, so this mutation is not ok - try other |
---|
| 644 | break; |
---|
| 645 | newRulesStr = tempStr; |
---|
| 646 | newRulesNr = rulesNr; newSetsStr = setsStr; newSetsNr = setsNr; |
---|
| 647 | genoRemoved+=2; |
---|
| 648 | // after removing of an input/output from the rule, an unused fuzzy set may occur |
---|
| 649 | //create space for new transformation table |
---|
| 650 | int *transTable = new int [newSetsNr]; |
---|
| 651 | for(int ii=0;ii<newSetsNr;ii++) transTable[ii]=ii; //formula 1:1 - no renumeration needed now |
---|
| 652 | int oldSetNr=newSetsNr; //remember number of sets used in new genotype, but before reduction |
---|
| 653 | //remove unused sets; if any set was removed, renumeration is needed |
---|
| 654 | if(removeUnusedSets(newSetsStr, newRulesStr, newSetsNr, transTable)) |
---|
| 655 | changeSetsNumeration(newRulesStr, transTable, oldSetNr); //renumerate new sets |
---|
| 656 | SAFEDELETEARRAY(transTable); |
---|
| 657 | mutated=true; |
---|
| 658 | break; |
---|
| 659 | } |
---|
| 660 | } |
---|
| 661 | } |
---|
| 662 | |
---|
| 663 | if(!mutated) |
---|
| 664 | return GENOPER_OPFAIL; |
---|
| 665 | |
---|
| 666 | //update new genotype |
---|
| 667 | pi.setIntById("ns", newSetsNr); |
---|
| 668 | pi.setIntById("nr", newRulesNr); |
---|
| 669 | pi.setStringById("fs",newSetsStr); |
---|
| 670 | pi.setStringById("fr",newRulesStr); |
---|
| 671 | pi.update(); //force commit changes |
---|
| 672 | model.close(); |
---|
| 673 | //get creature whole genotype |
---|
| 674 | finalGenotype=model.getF0Geno().getGene(); |
---|
| 675 | |
---|
| 676 | //replace old genotype with new one |
---|
| 677 | free(g); |
---|
| 678 | g=strdup((const char*)finalGenotype); |
---|
| 679 | |
---|
| 680 | chg=(float)(genoAdded+genoRemoved)/(genoAdded+genoRemoved+max(genoUsed-genoRemoved, 0)); |
---|
| 681 | |
---|
| 682 | return GENOPER_OK; |
---|
| 683 | } |
---|
| 684 | |
---|
| 685 | int Geno_f0Fuzzy::checkOrValidate(char *&geno, bool repair) |
---|
| 686 | //checks or validates genotype (depends on repair param) |
---|
| 687 | { //all genotype received, but only fuzzy part is to be validated!!! |
---|
| 688 | //"Fuzzy: [declarations], [sets], [rules]" |
---|
| 689 | SString tok, repairedSets, repairedRules, finalGenotype; |
---|
| 690 | char tempChar50[50]; |
---|
| 691 | int pos=0, i, j, setsFound, rulesFound; |
---|
| 692 | double set[4]; |
---|
| 693 | |
---|
| 694 | Model model(Geno(geno,'0')); |
---|
| 695 | if (!(model.isValid())) { if(repair) return GENOPER_OK; else return 1; } //ERROR |
---|
| 696 | Neuro *fuzzy=findNeuro(&model, Neuro::getClass("Fuzzy")); |
---|
| 697 | if (!fuzzy) { if(repair) return GENOPER_OK; else return 1; } //ERROR |
---|
| 698 | const int inputsDeclared=fuzzy->getInputCount(); |
---|
| 699 | const int outputsDeclared=NI_FuzzyNeuro::countOuts(&model,fuzzy); |
---|
| 700 | if((inputsDeclared<=0)||(outputsDeclared<=0)) |
---|
| 701 | { if(repair) return GENOPER_OK; else return 1; } //ERROR |
---|
| 702 | |
---|
| 703 | //get neuron four properties |
---|
| 704 | SyntParam pi=fuzzy->classProperties(); |
---|
| 705 | model.open(); |
---|
| 706 | int setsDeclared=pi.getIntById("ns"); |
---|
| 707 | int rulesDeclared=pi.getIntById("nr"); |
---|
| 708 | const SString fuzzySets=pi.getStringById("fs"); |
---|
| 709 | const SString fuzzyRules=pi.getStringById("fr"); |
---|
| 710 | |
---|
| 711 | //unrepairable errors: there must be some string! |
---|
| 712 | if((fuzzySets.len()==0)||(fuzzyRules.len()==0)) |
---|
| 713 | if(repair) return GENOPER_OK; //ERROR |
---|
| 714 | else return 2; //ERROR |
---|
| 715 | |
---|
| 716 | if((!repair)&&((setsDeclared<=0)||(rulesDeclared<=0))) |
---|
| 717 | return 2; //ERROR |
---|
| 718 | |
---|
| 719 | //repair if corrupted |
---|
| 720 | if(setsDeclared<=0)setsDeclared=1; |
---|
| 721 | if(rulesDeclared<=0)rulesDeclared=1; |
---|
| 722 | |
---|
| 723 | //now fuzzy sets are defined; each number is separated with semicolon. |
---|
| 724 | //acceptables signs are: digits, commas, colons, semicolons. |
---|
| 725 | i=j=0; setsFound=0; |
---|
| 726 | while (j<fuzzySets.len()) |
---|
| 727 | { |
---|
| 728 | SString acceptSigns; //string with acceptable signs |
---|
| 729 | fuzzySets.getNextToken(j,tok,';'); |
---|
| 730 | if(tok.len()==0) { if(!repair) return j; else continue; }//might happen, when two semicolons stand side by side |
---|
| 731 | //copy only acceptable signs |
---|
| 732 | for(int ii=0;ii<tok.len();ii++) |
---|
| 733 | if(strchr("0123456789.-;", tok[ii])) acceptSigns += tok[ii]; |
---|
| 734 | else if(!repair) return j; |
---|
| 735 | set[i]=atof(acceptSigns); |
---|
| 736 | if(set[i]<-1) { if(!repair) return j; else set[i] = -1; }//out of range |
---|
| 737 | if(set[i]>1) { if(!repair) return j; else set[i] = 1; }//out of range |
---|
| 738 | if(set[i]==HUGE_VAL) { if(!repair) return j; else set[i] = (i>0?set[i-1]:-1); }//sets must not be decreasing |
---|
| 739 | |
---|
| 740 | if(++i==4) |
---|
| 741 | { |
---|
| 742 | //check if sets are rank rising |
---|
| 743 | if((set[0]>set[1])||(set[1]>set[2])||(set[2]>set[3])) |
---|
| 744 | { if(!repair) return j; else sortSet(set); } |
---|
| 745 | if(sprintf(tempChar50, "%.4lf;%.4lf;%.4lf;%.4lf;", set[0], set[1], set[2], set[3]) != EOF) |
---|
| 746 | {i=0; setsFound++; repairedSets += tempChar50;} //copy correct value |
---|
| 747 | } |
---|
| 748 | |
---|
| 749 | if((setsFound==setsDeclared)&&(repair)) |
---|
| 750 | break; //found enough sets - if there were some sets left, omit them |
---|
| 751 | } |
---|
| 752 | // valitadion: if there were more sets than declares, nothing happens, because pointer is now after comma (end of all sets) |
---|
| 753 | // checking: error |
---|
| 754 | if((setsFound!=setsDeclared)&&(!repair)) |
---|
| 755 | return j; //ERROR - wrong number of fuzzy sets in definition or abnormal end of the string |
---|
| 756 | |
---|
| 757 | //now fuzzy rules are defined; each number is separated with semicolon, conditional and decisional part is separated with colon, rules are separated with slash |
---|
| 758 | //acceptables signs are: digits, semicolons, colons, slashes. |
---|
| 759 | i=0; rulesFound=0; pos=0; |
---|
| 760 | while (pos<fuzzyRules.len()) //to the end of string - process loop for each rule |
---|
| 761 | { |
---|
| 762 | SString ruleSStr, ruleCondisSStr, ruleDecisSStr, nrSStr, acceptSigns; |
---|
| 763 | int posRule=0, colons, i, posTemp, inputsUsedNr, outputsUsedNr; |
---|
| 764 | int *inoutUsed, posOld; |
---|
| 765 | bool firstInput, firstOutput; |
---|
| 766 | |
---|
| 767 | posOld=pos; acceptSigns = ""; |
---|
| 768 | fuzzyRules.getNextToken(pos,ruleSStr,'/'); |
---|
| 769 | for(int ii=0;ii<pos-posOld;ii++) |
---|
| 770 | if(strchr("0123456789;:/", ruleSStr[ii])) |
---|
| 771 | acceptSigns += ruleSStr[ii]; |
---|
| 772 | else if(!repair) return j+pos; //ERROR - unacceptable sign |
---|
| 773 | //cut conditional part |
---|
| 774 | acceptSigns.getNextToken(posRule,ruleCondisSStr,':'); |
---|
| 775 | //cut decisional part |
---|
| 776 | acceptSigns.getNextToken(posRule,ruleDecisSStr,'/'); |
---|
| 777 | |
---|
| 778 | //check, how many inputs is used: |
---|
| 779 | colons=posRule=0; |
---|
| 780 | while(++posRule<ruleCondisSStr.len()) |
---|
| 781 | if(ruleCondisSStr[posRule]==';') colons++; |
---|
| 782 | if(!(colons%2)) //nr of colons must be odd. this rule is corrupted |
---|
| 783 | {if(!repair) return j+pos; else continue; }//check another rule |
---|
| 784 | |
---|
| 785 | inputsUsedNr=(colons+1)/2; //count nr of inputs |
---|
| 786 | if((inputsUsedNr>inputsDeclared)&&(!repair)) |
---|
| 787 | return j+pos; //ERROR: too many inputs |
---|
| 788 | //when repair: if inputsUsedNr > declared, do nothing, because later in loop it is checked whether |
---|
| 789 | //there is no duplicate input number (the only possible way of situation where inputsUsedNr > declared) |
---|
| 790 | |
---|
| 791 | //check how many outputs is used: |
---|
| 792 | colons=posRule=0; |
---|
| 793 | while(++posRule<ruleDecisSStr.len()) |
---|
| 794 | if(ruleDecisSStr[posRule]==';') colons++; |
---|
| 795 | if(!(colons%2)) //nr of colons must be odd. this rule is corrupted - omit one |
---|
| 796 | {if(!repair) return j+pos; else continue; }//check another rule |
---|
| 797 | |
---|
| 798 | outputsUsedNr=(colons+1)/2; //count nr of outputs |
---|
| 799 | if((outputsUsedNr>outputsDeclared)&&(!repair)) |
---|
| 800 | return j+pos; //ERROR: too many outputs |
---|
| 801 | //when repair: if outputsUsedNr > declared, do nothing, because later in loop it is checked, wether |
---|
| 802 | //there is no duplicate output number (the only possible way of situation where outputsUsedNr > declared) |
---|
| 803 | inoutUsed = new int[max(inputsDeclared,outputsDeclared)]; |
---|
| 804 | for(i=0;i<max(inputsDeclared,outputsDeclared);i++) inoutUsed[i]=0; //0=unused, -1 = used by input, +1 used by output |
---|
| 805 | firstInput=true; firstOutput=true; |
---|
| 806 | //check, whether inputs/outputs or fuzzy set nr is not out of range |
---|
| 807 | //and check, whether there is no duplicate input/output number |
---|
| 808 | for(i=0,posTemp=0;i<inputsUsedNr+outputsUsedNr;i++) |
---|
| 809 | { |
---|
| 810 | int tempVal; |
---|
| 811 | if(i==inputsUsedNr) posTemp=0; //because in decision string - parse string from begin |
---|
| 812 | if(i<inputsUsedNr) //concern inputs |
---|
| 813 | { |
---|
| 814 | //check input |
---|
| 815 | acceptSigns = ""; posOld=posTemp; |
---|
| 816 | ruleCondisSStr.getNextToken(posTemp,nrSStr,';'); |
---|
| 817 | for(int ii=0;ii<nrSStr.len();ii++) |
---|
| 818 | if(strchr("0123456789", nrSStr[ii])) |
---|
| 819 | acceptSigns += nrSStr[ii]; |
---|
| 820 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} //ERROR - out of range |
---|
| 821 | tempVal=atoi(acceptSigns); |
---|
| 822 | if(tempVal<0) |
---|
| 823 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=0;} |
---|
| 824 | if(tempVal>=inputsDeclared) |
---|
| 825 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=inputsDeclared-1; } |
---|
| 826 | if(inoutUsed[tempVal]==-1) //input is used |
---|
| 827 | { |
---|
| 828 | ruleCondisSStr.getNextToken(posTemp,nrSStr,';'); //omit input and fuzzy set |
---|
| 829 | if(i+1 == inputsUsedNr) repairedRules += ":"; //the end of conditional part - must be here, because of continue |
---|
| 830 | if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else continue;//next for loop |
---|
| 831 | } |
---|
| 832 | else |
---|
| 833 | inoutUsed[tempVal]=-1; //used by input |
---|
| 834 | if(!firstInput) repairedRules += ";"; //before input there is semicolon, except of begin of the rule |
---|
| 835 | firstInput=false; |
---|
| 836 | //tempVal now has a correct value |
---|
| 837 | sprintf(tempChar50, "%i;", tempVal); |
---|
| 838 | //correct input number: |
---|
| 839 | repairedRules += tempChar50; |
---|
| 840 | //check fuzzy set nr |
---|
| 841 | acceptSigns = ""; posOld=posTemp; |
---|
| 842 | ruleCondisSStr.getNextToken(posTemp,nrSStr,';'); |
---|
| 843 | for(int ii=0;ii<nrSStr.len();ii++) |
---|
| 844 | if(strchr("0123456789", nrSStr[ii])) |
---|
| 845 | acceptSigns += nrSStr[ii]; |
---|
| 846 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} |
---|
| 847 | } |
---|
| 848 | else //concern output |
---|
| 849 | { |
---|
| 850 | //check output |
---|
| 851 | acceptSigns = ""; posOld=posTemp; |
---|
| 852 | ruleDecisSStr.getNextToken(posTemp,nrSStr,';'); |
---|
| 853 | for(int ii=0;ii<nrSStr.len();ii++) |
---|
| 854 | if(strchr("0123456789", nrSStr[ii])) |
---|
| 855 | acceptSigns += nrSStr[ii]; |
---|
| 856 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} |
---|
| 857 | tempVal=atoi(acceptSigns); |
---|
| 858 | if(tempVal<0) |
---|
| 859 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=0;} |
---|
| 860 | if(tempVal>=outputsDeclared) |
---|
| 861 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=outputsDeclared-1; } |
---|
| 862 | if(inoutUsed[tempVal]==1) //output is used |
---|
| 863 | { |
---|
| 864 | ruleDecisSStr.getNextToken(posTemp,nrSStr,';'); //omit output and fuzzy set |
---|
| 865 | if (i+1 == inputsUsedNr+outputsUsedNr) repairedRules += "/"; //the end of decisional part - must be here, because of continue |
---|
| 866 | if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else continue; //next for loop |
---|
| 867 | } |
---|
| 868 | else |
---|
| 869 | inoutUsed[tempVal]=1; //used by output |
---|
| 870 | if(!firstOutput) repairedRules += ";"; //before output there is semicolon, except of begin of the decisional part of the rule |
---|
| 871 | firstOutput=false; |
---|
| 872 | //tempVal now has a correct value |
---|
| 873 | sprintf(tempChar50, "%i;", tempVal); |
---|
| 874 | //correct output number: |
---|
| 875 | repairedRules += tempChar50; |
---|
| 876 | //check fuzzy set nr |
---|
| 877 | acceptSigns = ""; posOld=posTemp; |
---|
| 878 | ruleDecisSStr.getNextToken(posTemp,nrSStr,';'); |
---|
| 879 | for(int ii=0;ii<nrSStr.len();ii++) |
---|
| 880 | if(strchr("0123456789", nrSStr[ii])) |
---|
| 881 | acceptSigns += nrSStr[ii]; |
---|
| 882 | else if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} |
---|
| 883 | } |
---|
| 884 | tempVal=atoi(acceptSigns); |
---|
| 885 | if(tempVal<0) |
---|
| 886 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=0;} |
---|
| 887 | if(tempVal>=setsFound) |
---|
| 888 | {if(!repair) {SAFEDELETEARRAY(inoutUsed) return j+pos;} else tempVal=setsFound-1; } |
---|
| 889 | //tempVal now has a correct value |
---|
| 890 | sprintf(tempChar50, "%i", tempVal); |
---|
| 891 | //correct set number: |
---|
| 892 | repairedRules += tempChar50; |
---|
| 893 | if(i+1 == inputsUsedNr) repairedRules += ":"; //the end of conditional part |
---|
| 894 | else if (i+1 == inputsUsedNr+outputsUsedNr) repairedRules += "/"; //the end of decisional part |
---|
| 895 | } |
---|
| 896 | SAFEDELETEARRAY(inoutUsed) |
---|
| 897 | rulesFound++; |
---|
| 898 | if ((rulesFound>=rulesDeclared)&&(repair)) |
---|
| 899 | break; //if there was more rules - omit them by not parsing any more |
---|
| 900 | if ((rulesFound>rulesDeclared)&&(!repair)) |
---|
| 901 | return j+pos; // ERROR - too many rules - stop parsing |
---|
| 902 | } |
---|
| 903 | |
---|
| 904 | if ((rulesFound!=rulesDeclared)&&(!repair)) |
---|
| 905 | return j+pos; // ERROR - wrong number of rules (too few) |
---|
| 906 | |
---|
| 907 | if(rulesFound<1) //could happen, when there is one rule and it is unrepairable |
---|
| 908 | { |
---|
| 909 | if(sprintf(tempChar50, "%i;%i:%i;%i/", randomN(inputsDeclared), randomN(setsFound), randomN(outputsDeclared), randomN(setsFound)) != EOF) |
---|
| 910 | repairedRules += tempChar50; //add simple random rule |
---|
| 911 | else //on error - add zeros |
---|
| 912 | repairedRules += "0;0:0;0/"; //add the simplies rule, but almost impossible to happen |
---|
| 913 | rulesFound=1; |
---|
| 914 | } |
---|
| 915 | |
---|
| 916 | //when changing sets numerations, rules might change and equals |
---|
| 917 | if((repair)&&(removeExcessiveRules(repairedRules, setsFound, rulesFound)<0)) |
---|
| 918 | return GENOPER_OPFAIL; //ERROR |
---|
| 919 | |
---|
| 920 | //update new genotype |
---|
| 921 | pi.setIntById("ns", setsFound); |
---|
| 922 | pi.setIntById("nr", rulesFound); |
---|
| 923 | pi.setStringById("fs",repairedSets); |
---|
| 924 | pi.setStringById("fr",repairedRules); |
---|
| 925 | pi.update(); //force commit changes |
---|
| 926 | model.close(); |
---|
| 927 | //get creature whole genotype |
---|
| 928 | finalGenotype=model.getF0Geno().getGene(); |
---|
| 929 | |
---|
| 930 | //replace old genotype with new one |
---|
| 931 | free(geno); |
---|
| 932 | geno=strdup((const char*)finalGenotype); |
---|
| 933 | |
---|
| 934 | return GENOPER_OK; |
---|
| 935 | }; |
---|
| 936 | |
---|
| 937 | int Geno_f0Fuzzy::checkValidity(const char *geno) |
---|
| 938 | { |
---|
| 939 | char *genoCopy=strdup(geno); |
---|
| 940 | int res=checkOrValidate(genoCopy, false); //false = on errors do not repair but return error position |
---|
| 941 | free(genoCopy); |
---|
| 942 | return res; |
---|
| 943 | }; |
---|
| 944 | |
---|
| 945 | int Geno_f0Fuzzy::validate(char *&geno) |
---|
| 946 | { |
---|
| 947 | checkOrValidate(geno, true); //true = on errors try to repair but might be unrepairable |
---|
| 948 | return GENOPER_OK; |
---|
| 949 | }; |
---|
| 950 | |
---|
| 951 | int Geno_f0Fuzzy::crossOver(char *&g1, char *&g2, float &chg1,float &chg2) |
---|
| 952 | { //both bodies should be the same; the only difference should be in fuzzy neuron |
---|
| 953 | |
---|
| 954 | SString finalGenotype, tok1, tok2; |
---|
| 955 | SString fuzzyGeno1, fuzzyGeno2, newSet, sets3, rules3; |
---|
| 956 | int setsNr3, rulesNr3; |
---|
| 957 | int i, j, k, unimpTemp; |
---|
| 958 | int *transTable, *parentsIn, *parentsOut, *parentRules, *rulDef1, *rulDef2, *rulDef3, **rulesBody1, **rulesBody2; |
---|
| 959 | int genoUsed1, genoUsed2, copied1, copied2, rulesTaken1, rulesTaken2, rulesUsed3, selectedRule1, selectedRule2; |
---|
| 960 | int inputsUsed, outputsUsed; |
---|
| 961 | char tempChar50[50]; |
---|
| 962 | double *fuzzySets1, *fuzzySets2, *fuzzySets3; |
---|
| 963 | |
---|
| 964 | Model model1(Geno(g1,'0')); |
---|
| 965 | Model model2(Geno(g2,'0')); |
---|
| 966 | Neuro *fuzzy1=findNeuro(&model1, Neuro::getClass("Fuzzy")); |
---|
| 967 | Neuro *fuzzy2=findNeuro(&model2, Neuro::getClass("Fuzzy")); |
---|
| 968 | if (!fuzzy1 || !fuzzy2) return GENOPER_OPFAIL; //ERROR |
---|
| 969 | const int inputsNr1=fuzzy1->getInputCount(); |
---|
| 970 | const int inputsNr2=fuzzy2->getInputCount(); |
---|
| 971 | const int outputsNr1=NI_FuzzyNeuro::countOuts(&model1,fuzzy1); |
---|
| 972 | const int outputsNr2=NI_FuzzyNeuro::countOuts(&model2,fuzzy2); |
---|
| 973 | if((inputsNr1<=0)||(outputsNr1<=0)||(inputsNr2<=0)||(outputsNr2<=0)|| |
---|
| 974 | (inputsNr1!=inputsNr2)||(outputsNr1!=outputsNr2)) return GENOPER_OPFAIL; //ERROR |
---|
| 975 | |
---|
| 976 | //get neurons four properties |
---|
| 977 | SyntParam pi1=fuzzy1->classProperties(); |
---|
| 978 | SyntParam pi2=fuzzy2->classProperties(); |
---|
| 979 | model1.open(); |
---|
| 980 | model2.open(); |
---|
| 981 | const int setsNr1=pi1.getIntById("ns"); |
---|
| 982 | const int setsNr2=pi2.getIntById("ns"); |
---|
| 983 | const int rulesNr1=pi1.getIntById("nr"); |
---|
| 984 | const int rulesNr2=pi2.getIntById("nr"); |
---|
| 985 | const SString sets1=pi1.getStringById("fs"); |
---|
| 986 | const SString sets2=pi2.getStringById("fs"); |
---|
| 987 | const SString rules1=pi1.getStringById("fr"); |
---|
| 988 | const SString rules2=pi2.getStringById("fr"); |
---|
| 989 | |
---|
| 990 | if((sets1.len()==0)||(rules1.len()==0)||(sets2.len()==0)||(rules2.len()==0)|| |
---|
| 991 | (setsNr1<=0)||(rulesNr1<=0)||(setsNr2<=0)||(rulesNr2<=0)) |
---|
| 992 | return GENOPER_OPFAIL; //ERROR |
---|
| 993 | |
---|
| 994 | //find out the real length of genotype - count number of semicolons |
---|
| 995 | genoUsed1 = 0; //1 geno is i.e. -0.325; but this are 7 characters! so, 1 is used, 6 are unused |
---|
| 996 | fuzzyGeno1 = sets1+", "+rules1; |
---|
| 997 | for(i=0;i<fuzzyGeno1.len();i++) |
---|
| 998 | if((fuzzyGeno1[i]==';')||(fuzzyGeno1[i]=='/')||(fuzzyGeno1[i]==':')) genoUsed1++; |
---|
| 999 | genoUsed2 = 0; //1 geno is i.e. -0.325; but this are 7 characters! so, 1 is used, 6 are unused |
---|
| 1000 | fuzzyGeno2 = sets2+", "+rules2; |
---|
| 1001 | for(i=0;i<fuzzyGeno2.len();i++) |
---|
| 1002 | if((fuzzyGeno2[i]==';')||(fuzzyGeno2[i]=='/')||(fuzzyGeno2[i]==':')) genoUsed2++; |
---|
| 1003 | |
---|
| 1004 | |
---|
| 1005 | // ------------------------------------- |
---|
| 1006 | // ------- cross over sets part -------- |
---|
| 1007 | // ------------------------------------- |
---|
| 1008 | |
---|
| 1009 | copied1=copied2=0; //how many gens (in whole rules and whole sets) were copied (without changeing!) from parent 1 / 2 ? |
---|
| 1010 | |
---|
| 1011 | fuzzySets1 = new double[4*setsNr1]; fuzzySets2 = new double[4*setsNr2]; |
---|
| 1012 | FuzzyF0String::convertStrToSets(sets1, fuzzySets1, setsNr1); |
---|
| 1013 | FuzzyF0String::convertStrToSets(sets2, fuzzySets2, setsNr2); |
---|
| 1014 | |
---|
| 1015 | //in fact, there is no crossing over of sets, but copy all parents' sets |
---|
| 1016 | //with marking duplicated sets |
---|
| 1017 | setsNr3 = setsNr1+setsNr2; |
---|
| 1018 | transTable = new int[setsNr3]; |
---|
| 1019 | for(i=0;i<setsNr1+setsNr2;i++) transTable[i]=-2; //all sets are taken to descendant |
---|
| 1020 | if(markDuplicatedSets(fuzzySets1, setsNr1, fuzzySets2, setsNr2, transTable, setsNr3)!=0) |
---|
| 1021 | { |
---|
| 1022 | SAFEDELETEARRAY(fuzzySets1) SAFEDELETEARRAY(fuzzySets2) SAFEDELETEARRAY(transTable) |
---|
| 1023 | return GENOPER_OPFAIL; //ERROR |
---|
| 1024 | } |
---|
| 1025 | |
---|
| 1026 | fuzzySets3 = new double[4*setsNr3]; |
---|
| 1027 | j=0; sets3 = ""; |
---|
| 1028 | //copy sets from parent 1 and 2 |
---|
| 1029 | for(i=0;(i<setsNr1+setsNr2)&&(j<setsNr3);i++) |
---|
| 1030 | if(transTable[i]==-2) //this set is marked to be taken |
---|
| 1031 | { |
---|
| 1032 | if(i<setsNr1) |
---|
| 1033 | { |
---|
| 1034 | fuzzySets3[4*j]=fuzzySets1[4*i]; fuzzySets3[4*j+1]=fuzzySets1[4*i+1]; |
---|
| 1035 | fuzzySets3[4*j+2]=fuzzySets1[4*i+2]; fuzzySets3[4*j+3]=fuzzySets1[4*i+3]; |
---|
| 1036 | } |
---|
| 1037 | else |
---|
| 1038 | { |
---|
| 1039 | fuzzySets3[4*j]=fuzzySets2[4*(i-setsNr1)]; fuzzySets3[4*j+1]=fuzzySets2[4*(i-setsNr1)+1]; |
---|
| 1040 | fuzzySets3[4*j+2]=fuzzySets2[4*(i-setsNr1)+2]; fuzzySets3[4*j+3]=fuzzySets2[4*(i-setsNr1)+3]; |
---|
| 1041 | }; |
---|
| 1042 | if(sprintf(tempChar50, "%.4lf;%.4lf;%.4lf;%.4lf;", fuzzySets3[4*j], fuzzySets3[4*j+1], fuzzySets3[4*j+2], fuzzySets3[4*j+3]) != EOF) |
---|
| 1043 | { |
---|
| 1044 | transTable[i] = j++; //remember, from which set it was copy: [4]=2 means that fuzzy set [4] from parent 1 was copy into descendant fuzzy set [2]. when i>setsNr1, substract setsNr1 from value to obtain number of fuzzy set from parent 2 |
---|
| 1045 | sets3 += tempChar50; |
---|
| 1046 | } |
---|
| 1047 | else |
---|
| 1048 | { |
---|
| 1049 | SAFEDELETEARRAY(fuzzySets1) |
---|
| 1050 | SAFEDELETEARRAY(fuzzySets2) |
---|
| 1051 | SAFEDELETEARRAY(fuzzySets3) |
---|
| 1052 | SAFEDELETEARRAY(transTable) |
---|
| 1053 | return GENOPER_OPFAIL; //ERROR |
---|
| 1054 | } |
---|
| 1055 | } |
---|
| 1056 | |
---|
| 1057 | // ------------------------------------- |
---|
| 1058 | // ------- cross over rules part ------- |
---|
| 1059 | // ------------------------------------- |
---|
| 1060 | |
---|
| 1061 | rules3=""; |
---|
| 1062 | //draw number of fuzzy rules for the descendant |
---|
| 1063 | rulesNr3 = min(rulesNr1,rulesNr2) + randomN(abs(rulesNr1-rulesNr2)+1); |
---|
| 1064 | |
---|
| 1065 | rulDef1 = new int[2*rulesNr1]; //for each rule, remembers number of inputs and number of outputs used (in rule) |
---|
| 1066 | rulDef2 = new int[2*rulesNr2]; |
---|
| 1067 | rulDef3 = new int[2*rulesNr3]; //it will be filled later, with random values |
---|
| 1068 | |
---|
| 1069 | FuzzyF0String::countInputsOutputs(rules1, rulDef1, rulesNr1); |
---|
| 1070 | FuzzyF0String::countInputsOutputs(rules2, rulDef2, rulesNr2); |
---|
| 1071 | for(i=0;i<2*rulesNr3;i++) rulDef3[i]=-1; //unknown number of inputs/outputs |
---|
| 1072 | |
---|
| 1073 | //create space for rules from parent 1 and 2 |
---|
| 1074 | rulesBody1 = new int*[rulesNr1]; //list of rules that will contain rules body |
---|
| 1075 | for (i=0;i<rulesNr1;i++) rulesBody1[i] = new int[2*(rulDef1[2*i]+rulDef1[2*i+1])]; //each rule can have different number of inputs and outputs |
---|
| 1076 | rulesBody2 = new int*[rulesNr2]; //list of rules that will contain rules body |
---|
| 1077 | for (i=0;i<rulesNr2;i++) rulesBody2[i] = new int[2*(rulDef2[2*i]+rulDef2[2*i+1])]; //each rule can have different number of inputs and outputs |
---|
| 1078 | |
---|
| 1079 | FuzzyF0String::convertStrToRules(rules1, rulDef1, rulesBody1, setsNr1, rulesNr1, unimpTemp); |
---|
| 1080 | FuzzyF0String::convertStrToRules(rules2, rulDef2, rulesBody2, setsNr2, rulesNr2, unimpTemp); |
---|
| 1081 | |
---|
| 1082 | //draw rules from both parents |
---|
| 1083 | parentRules = new int[rulesNr1+rulesNr2]; |
---|
| 1084 | for(i=0;i<rulesNr1+rulesNr2;i++) parentRules[i]=-1; //any rule is taken yet |
---|
| 1085 | |
---|
| 1086 | rulesTaken1=rulesTaken2=rulesUsed3=0; |
---|
| 1087 | while(rulesUsed3<rulesNr3) |
---|
| 1088 | { |
---|
| 1089 | //draw rule from parent 1 |
---|
| 1090 | selectedRule1=-1; |
---|
| 1091 | if(rulesTaken1<rulesNr1) //if there are some rules left in parent 1 |
---|
| 1092 | { |
---|
| 1093 | //select random rule from parent 1 |
---|
| 1094 | k=randomN(rulesNr1); |
---|
| 1095 | if(parentRules[k]==-1) selectedRule1=k; |
---|
| 1096 | else //if rule is taken, search the nearest free |
---|
| 1097 | for(j=0;j<rulesNr1;j++) |
---|
| 1098 | if(parentRules[(k+j)%rulesNr1]==-1) { selectedRule1=(k+j)%rulesNr1; j=rulesNr1; } |
---|
| 1099 | else if(parentRules[abs((k-j)%rulesNr1)]==-1) { selectedRule1=abs((k-j)%rulesNr1); j=rulesNr1; } |
---|
| 1100 | } |
---|
| 1101 | if (selectedRule1==-1) //all rules are taken from parent 1 |
---|
| 1102 | break; |
---|
| 1103 | |
---|
| 1104 | //draw rule from parent 2 |
---|
| 1105 | selectedRule2=-1; |
---|
| 1106 | if(rulesTaken2<rulesNr2) //if there are some rules left in parent 2 |
---|
| 1107 | { |
---|
| 1108 | //select random rule from parent 2 |
---|
| 1109 | k=randomN(rulesNr2); |
---|
| 1110 | if(parentRules[rulesNr1+k]==-1) { parentRules[rulesNr1+k]=-2; selectedRule2=k; } //mark as 'taken' |
---|
| 1111 | else //if rule is taken, search the nearest free |
---|
| 1112 | for(j=0;j<rulesNr2;j++) |
---|
| 1113 | if(parentRules[rulesNr1+(k+j)%rulesNr2]==-1) {selectedRule2=(k+j)%rulesNr2; j=rulesNr2; } |
---|
| 1114 | else if(parentRules[rulesNr1+abs((k-j)%rulesNr2)]==-1) { selectedRule2=abs((k-j)%rulesNr2); j=rulesNr2; } |
---|
| 1115 | } |
---|
| 1116 | |
---|
| 1117 | if (selectedRule2==-1) //all rules are taken from parent 1 |
---|
| 1118 | break; |
---|
| 1119 | |
---|
| 1120 | parentRules[selectedRule1]=-2; //mark as 'taken' |
---|
| 1121 | parentRules[rulesNr1+selectedRule2]=-2; |
---|
| 1122 | |
---|
| 1123 | //draw number of inputs and outputs in new rule, (created by crossing over of 2 parents) |
---|
| 1124 | rulDef3[2*rulesUsed3] = min(rulDef1[2*selectedRule1], rulDef2[2*selectedRule2]) + randomN(abs(rulDef1[2*selectedRule1]-rulDef2[2*selectedRule2])+1); //random number of inputs |
---|
| 1125 | rulDef3[2*rulesUsed3+1] = min(rulDef1[2*selectedRule1+1], rulDef2[2*selectedRule2+1]) + randomN(abs(rulDef1[2*selectedRule1+1]-rulDef2[2*selectedRule2+1])+1); //random number of outputs |
---|
| 1126 | |
---|
| 1127 | int nrInputsP1 = rulDef1[2*selectedRule1], nrInputsP2 = rulDef2[2*selectedRule2], //some variables' names |
---|
| 1128 | nrOutputsP1 = rulDef1[2*selectedRule1+1], nrOutputsP2 = rulDef2[2*selectedRule2+1], //become now more understandable |
---|
| 1129 | nrInputsP3 = rulDef3[2*rulesUsed3], nrOutputsP3 = rulDef3[2*rulesUsed3+1]; |
---|
| 1130 | |
---|
| 1131 | //prepare drawing inputs from parent 1 and 2 |
---|
| 1132 | int sumParentsInputs = nrInputsP1+nrInputsP2; |
---|
| 1133 | parentsIn = new int[sumParentsInputs]; //size: parent's 1 and 2 number of inputs |
---|
| 1134 | |
---|
| 1135 | for(i=0;i<sumParentsInputs;i++) parentsIn[i]=-1; //not taken yet |
---|
| 1136 | //search for duplicated output and mark one of them outputs as 'taken' |
---|
| 1137 | for(i=0;i<nrInputsP1;i++) |
---|
| 1138 | for(j=0;j<nrInputsP2;j++) |
---|
| 1139 | if(rulesBody1[selectedRule1][2*i]==rulesBody2[selectedRule2][2*j]) //if inputs numbers are the same, |
---|
| 1140 | { |
---|
| 1141 | bool takenP1=rnd01<0.5; //draw, which input should be mark as taken |
---|
| 1142 | if (takenP1) parentsIn[i]=-2; |
---|
| 1143 | else parentsIn[j+nrInputsP1]=-2; |
---|
| 1144 | } |
---|
| 1145 | |
---|
| 1146 | //now drawig is well prepared |
---|
| 1147 | inputsUsed=0; |
---|
| 1148 | while(inputsUsed<nrInputsP3) //loop as long, as inputs taken (from p1&p2) < length of descendant's input part |
---|
| 1149 | { |
---|
| 1150 | //draw input (which was not used yet) from both parents |
---|
| 1151 | do k=randomN(sumParentsInputs); |
---|
| 1152 | while (parentsIn[k]!=-1); //draw as long, as input is not taken yet |
---|
| 1153 | if(k<nrInputsP1) //concerns input from parent 1 |
---|
| 1154 | sprintf(tempChar50, "%i;%i", rulesBody1[selectedRule1][2*k], transTable[rulesBody1[selectedRule1][2*k+1]]); //get input and transformated fuzzy set nr |
---|
| 1155 | else //concerns input from parent 2 |
---|
| 1156 | sprintf(tempChar50, "%i;%i", rulesBody2[selectedRule2][2*(k-nrInputsP1)], transTable[setsNr1+rulesBody2[selectedRule2][2*(k-nrInputsP1)+1]]); //get input and transformated fuzzy set nr. setsNr1+ because transTable is sum of setsNr1+setsNr2 |
---|
| 1157 | rules3 += tempChar50; |
---|
| 1158 | if (inputsUsed+1<nrInputsP3) rules3 += ";"; |
---|
| 1159 | inputsUsed++; parentsIn[k]=-2; //mark as taken |
---|
| 1160 | } |
---|
| 1161 | rules3 += ":"; |
---|
| 1162 | |
---|
| 1163 | SAFEDELETEARRAY(parentsIn) |
---|
| 1164 | |
---|
| 1165 | //prepare drawing outputs from parent 1 and 2 |
---|
| 1166 | int sumParentsOutputs = nrOutputsP1+nrOutputsP2; |
---|
| 1167 | parentsOut = new int[sumParentsOutputs]; //size: parent's 1 and 2 number of inputs |
---|
| 1168 | |
---|
| 1169 | for(i=0;i<sumParentsOutputs;i++) parentsOut[i]=-1; //not taken yet |
---|
| 1170 | //search duplicated output and mark one of them outputs as 'taken' |
---|
| 1171 | for(i=0;i<nrOutputsP1;i++) |
---|
| 1172 | for(j=0;j<nrOutputsP2;j++) |
---|
| 1173 | if(rulesBody1[selectedRule1][2*(i+nrInputsP1)]==rulesBody2[selectedRule2][2*(j+nrInputsP2)]) //if outputs numbers are the same, |
---|
| 1174 | { |
---|
| 1175 | bool takenP1=rnd01<0.5; //draw, which input should be mark as taken |
---|
| 1176 | if (takenP1) parentsOut[i]=-2; |
---|
| 1177 | else parentsOut[j+nrOutputsP1]=-2; |
---|
| 1178 | } |
---|
| 1179 | |
---|
| 1180 | //now drawig is well prepared |
---|
| 1181 | outputsUsed=0; |
---|
| 1182 | while(outputsUsed<nrOutputsP3) //loop as long, as outputs taken (from p1&p2) < length of descendant's output part |
---|
| 1183 | { |
---|
| 1184 | //draw output (which was not used yet) from both parents |
---|
| 1185 | do k=randomN(sumParentsOutputs); |
---|
| 1186 | while (parentsOut[k]!=-1); //draw as long, as output is not taken yet |
---|
| 1187 | if(k<nrOutputsP1) //concerns output from parent 1 |
---|
| 1188 | sprintf(tempChar50, "%i;%i", rulesBody1[selectedRule1][2*(k+nrInputsP1)], transTable[rulesBody1[selectedRule1][2*(k+nrInputsP1)+1]]); //get output and transformated fuzzy set nr |
---|
| 1189 | else //concerns output from parent 2 |
---|
| 1190 | sprintf(tempChar50, "%i;%i", rulesBody2[selectedRule2][2*(k-nrOutputsP1+nrInputsP2)], transTable[setsNr1+rulesBody2[selectedRule2][2*(k-nrOutputsP1+nrInputsP2)+1]]); //get output and transformated fuzzy set nr |
---|
| 1191 | rules3 += tempChar50; |
---|
| 1192 | if (outputsUsed+1<nrOutputsP3) rules3 += ";"; |
---|
| 1193 | outputsUsed++; parentsOut[k]=-2; //mark as taken |
---|
| 1194 | } |
---|
| 1195 | rules3 += "/"; |
---|
| 1196 | |
---|
| 1197 | SAFEDELETEARRAY(parentsOut) |
---|
| 1198 | |
---|
| 1199 | rulesUsed3++; rulesTaken1++; rulesTaken2++; |
---|
| 1200 | } |
---|
| 1201 | |
---|
| 1202 | //if there is no more rules pairs, and descendant needs more rules, copy rules from 'bigger' parent |
---|
| 1203 | if(rulesTaken1<rulesNr1) |
---|
| 1204 | { |
---|
| 1205 | for(j=0;(j<rulesNr1)&&(rulesUsed3<rulesNr3);j++) |
---|
| 1206 | if(parentRules[j]==-1) //search for not taken rule |
---|
| 1207 | { |
---|
| 1208 | parentRules[j]=-2; //taken |
---|
| 1209 | rulDef3[2*rulesUsed3] = rulDef1[2*j]; rulDef3[2*rulesUsed3+1] = rulDef1[2*j+1]; //copy whole rule - do not change number of inputs and outputs |
---|
| 1210 | for(k=0;k<rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1];k++) //copy conditional and decisional part |
---|
| 1211 | { |
---|
| 1212 | sprintf(tempChar50, "%i;%i", rulesBody1[j][2*k], transTable[rulesBody1[j][2*k+1]]); |
---|
| 1213 | rules3 += tempChar50; |
---|
| 1214 | if(k+1==rulDef3[2*rulesUsed3]) //if end of inputs, put colon |
---|
| 1215 | rules3 += ":"; |
---|
| 1216 | else if(k+1==rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1]) //if end of outputs, put slash |
---|
| 1217 | rules3 += "/"; |
---|
| 1218 | else |
---|
| 1219 | rules3 += ";"; |
---|
| 1220 | } |
---|
| 1221 | rulesUsed3++; rulesTaken1++; |
---|
| 1222 | copied1+=2*k; //all inputs, fuzzy sets, ..., all outputs, fuzzy sets |
---|
| 1223 | } |
---|
| 1224 | } |
---|
| 1225 | if(rulesTaken2<rulesNr2) |
---|
| 1226 | for(j=0;(j<rulesNr2)&&(rulesUsed3<rulesNr3);j++) |
---|
| 1227 | if(parentRules[rulesNr1+j]==-1) //search for not taken rule |
---|
| 1228 | { |
---|
| 1229 | selectedRule2=j; parentRules[rulesNr1+j]=-2; //taken |
---|
| 1230 | rulDef3[2*rulesUsed3] = rulDef2[2*j]; rulDef3[2*rulesUsed3+1] = rulDef2[2*j+1]; //copy whole rule - do not change number of inputs and outputs |
---|
| 1231 | for(k=0;k<rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1];k++) //copy conditional and decisional part |
---|
| 1232 | { |
---|
| 1233 | sprintf(tempChar50, "%i;%i", rulesBody2[j][2*k], transTable[setsNr1+rulesBody2[j][2*k+1]]); |
---|
| 1234 | rules3 += tempChar50; |
---|
| 1235 | if(k+1==rulDef3[2*rulesUsed3]) //if end of inputs, put colon |
---|
| 1236 | rules3 += ":"; |
---|
| 1237 | else if(k+1==rulDef3[2*rulesUsed3]+rulDef3[2*rulesUsed3+1]) //if end of outputs, put slash |
---|
| 1238 | rules3 += "/"; |
---|
| 1239 | else |
---|
| 1240 | rules3 += ";"; |
---|
| 1241 | } |
---|
| 1242 | rulesUsed3++; rulesTaken2++; |
---|
| 1243 | copied2+=2*k; //all outputs, fuzzy sets, ..., all outputs, fuzzy sets |
---|
| 1244 | } |
---|
| 1245 | |
---|
| 1246 | //no need to normalize before removing unused sets, because correct (new) number of fuzzy set already written in rules string |
---|
| 1247 | |
---|
| 1248 | //delete 'old' transTable |
---|
| 1249 | SAFEDELETEARRAY(transTable) |
---|
| 1250 | |
---|
| 1251 | //create space for new transformation table |
---|
| 1252 | transTable=new int [setsNr3]; |
---|
| 1253 | for(int ii=0;ii<setsNr3;ii++) transTable[ii]=ii; //formula 1:1 - no renumeration needed now |
---|
| 1254 | |
---|
| 1255 | int oldSetNr=setsNr3; //remember number of sets used in new genotype, but before reduction |
---|
| 1256 | //remove unused sets; if any set was removed, renumeration is needed |
---|
| 1257 | if(removeUnusedSets(sets3, rules3, setsNr3, transTable)) |
---|
| 1258 | changeSetsNumeration(rules3, transTable, oldSetNr); //renumerate new sets |
---|
| 1259 | //after renumeration, excessive rule or input/output may occur |
---|
| 1260 | if((removeExcessiveInOut(rules3, inputsNr1, outputsNr1)<0)|| |
---|
| 1261 | (removeExcessiveRules(rules3, setsNr3, rulesNr3)<0)) |
---|
| 1262 | { //should not occur |
---|
| 1263 | SAFEDELETEARRAY(rulDef1) SAFEDELETEARRAY(rulDef2) SAFEDELETEARRAY(rulDef3) |
---|
| 1264 | SAFEDELETEARRAY(transTable) SAFEDELETEARRAY(parentRules) SAFEDELETEARRAY(parentsIn) SAFEDELETEARRAY(parentsOut) |
---|
| 1265 | SAFEDELETEARRAY(fuzzySets1) SAFEDELETEARRAY(fuzzySets2) SAFEDELETEARRAY(fuzzySets3) |
---|
| 1266 | if(rulesBody1) for(i=0;i<rulesNr1;i++) SAFEDELETEARRAY(rulesBody1[i]) |
---|
| 1267 | if(rulesBody2) for(i=0;i<rulesNr2;i++) SAFEDELETEARRAY(rulesBody2[i]) |
---|
| 1268 | SAFEDELETEARRAY(rulesBody1) SAFEDELETEARRAY(rulesBody2) |
---|
| 1269 | return GENOPER_OPFAIL; //did not successed |
---|
| 1270 | } |
---|
| 1271 | //--------------------- end of crossing over -------------------------------- |
---|
| 1272 | |
---|
| 1273 | if( (sets3.len()==0)||(rules3.len()==0) ) //shold not occur, but for safety: |
---|
| 1274 | {sets3="-1;0;0;1;"; rules3="0;0:0;0/"; setsNr3=1; rulesNr3=1; } |
---|
| 1275 | |
---|
| 1276 | //update new genotype |
---|
| 1277 | pi1.setIntById("ns", setsNr3); |
---|
| 1278 | pi1.setIntById("nr", rulesNr3); |
---|
| 1279 | pi1.setStringById("fs",sets3); |
---|
| 1280 | pi1.setStringById("fr",rules3); |
---|
| 1281 | pi1.update(); //force commit changes |
---|
| 1282 | model1.close(); |
---|
| 1283 | //get creature whole genotype |
---|
| 1284 | finalGenotype=model1.getF0Geno().getGene(); |
---|
| 1285 | |
---|
| 1286 | //replace old genotype with new one |
---|
| 1287 | free(g1); |
---|
| 1288 | g1=strdup((const char*)finalGenotype); |
---|
| 1289 | |
---|
| 1290 | chg1=1-(float)copied1/genoUsed1; |
---|
| 1291 | chg2=1-(float)copied2/genoUsed2; |
---|
| 1292 | |
---|
| 1293 | SAFEDELETEARRAY(rulDef1) |
---|
| 1294 | SAFEDELETEARRAY(rulDef2) |
---|
| 1295 | SAFEDELETEARRAY(rulDef3) |
---|
| 1296 | SAFEDELETEARRAY(transTable) |
---|
| 1297 | SAFEDELETEARRAY(parentRules) |
---|
| 1298 | SAFEDELETEARRAY(parentsIn) |
---|
| 1299 | SAFEDELETEARRAY(parentsOut) |
---|
| 1300 | SAFEDELETEARRAY(fuzzySets1) |
---|
| 1301 | SAFEDELETEARRAY(fuzzySets2) |
---|
| 1302 | SAFEDELETEARRAY(fuzzySets3) |
---|
| 1303 | if(rulesBody1) for(i=0;i<rulesNr1;i++) SAFEDELETEARRAY(rulesBody1[i]) |
---|
| 1304 | if(rulesBody2) for(i=0;i<rulesNr2;i++) SAFEDELETEARRAY(rulesBody2[i]) |
---|
| 1305 | SAFEDELETEARRAY(rulesBody1) |
---|
| 1306 | SAFEDELETEARRAY(rulesBody2) |
---|
| 1307 | |
---|
| 1308 | return GENOPER_OK; |
---|
| 1309 | }; |
---|
| 1310 | |
---|
| 1311 | |
---|
| 1312 | |
---|